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. 2022 May 21;36(7):2921–2939. doi: 10.1002/ptr.7486

TABLE 6.

Molecular modeling of silibinin within the binding active site of TMPRSS2 compared to the native ligand

Compound Moiety Interaction Amino acid residue
Silibinin OH H‐bond Glu‐218
OH H‐bond Arg‐41
OH H‐bond Thr‐62
Phenyl Pi‐cation bond Arg‐41
CH2OH Pi‐cation bond His‐57 and Gly‐197
Phenyl ring Hydrophobic bond Cys‐219, Gln‐192 and Thr‐63
Native ligand NH H‐bond Asp‐189
NH2 H‐bond Asp‐189
NH2 H‐bond Glu‐218
CH Aromatic H‐bond Glu‐216 and Gly‐216
Phenyl ring Hydrophobic bond Val‐213
Phenyl ring Hydrophobic bond Ala‐190