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. 2021 Mar 27;12(3):424–436. doi: 10.34172/apb.2022.047

Table 5. The results of docking analysis between metalloprotease of P. polymyxa (as a protein) and ligands involved in biofilm formation in S. aureus and P. aeruginosa .

Strain Ligand Binding energy (kcal/mol) Possible amino acids involved in the interaction
S. aureus PSM -181 Gly, His, Glu, Tyr, Asp, Asn, Val,
P. aeruginosa Sodium alginate -123 Gln, Gly, Glu,
Lectin -189 Gly, Asn, Tyr, Trp, Leu