Table 6. The results of docking analysis between enterocin (as a ligand) and proteins involved in biofilm formation in S. aureus and P, aeruginosa .
Strain | Protein | Binding energy (kcal/mol) | Possible amino acids involved in the interaction |
S. aureus | ClfB | -124 | Thr, Asn, Gly, Asp, Ile, Lys, Arg, Ala |
SdrC | -171 | Ile, Lys, Thr, Glu, Gln, Tyr, Asn, Val | |
SasG | -100 | Asp, Ile | |
FnBP | -161 | Gly, Arg, Ala, Lys, Asp | |
P. aeruginosa | AlgC | -165 | Gly, Glu, Thr, Lys, Met, Phe |
PslG | -140 | Glu, Gln, Leu, Gly, Ser, Arg, | |
LasI | -138 | Thr, Arg, Val, Phe | |
PelB | -127 | Trp, Phe, Gly, |