Table 1. Simulation results under different relationships between the genetic variants and the exposure at each time point.
MR | MVMR | ||
---|---|---|---|
Exposures associated with different liability periods | |||
β 1 | Liability effect | 0.344 | 0.200 |
Effect estimate | 0.340 | 0.1958 | |
Est. Std. Error | 0.029 | 0.0107 | |
Simulation Std. Error | 0.011 | 0.0106 | |
Absolute bias | 0.010 | 0.0092 | |
Coverage | 100% | 93% | |
F-statistic | 96.31 | ||
Conditional F-statistic | 55.76 | ||
No. SNPs | 72 | 114 | |
β 2 | Liability effect | 0.376 | 0.300 |
Effect estimate | 0.371 | 0.297 | |
Est. Std. Error | 0.015 | 0.009 | |
Simulation Std. Error | 0.008 | 0.009 | |
Absolute bias | 0.008 | 0.008 | |
Coverage | 99% | 94% | |
F-statistic | 129.31 | ||
Conditional F-statistic | 78.01 | ||
No. SNPs | 83 | 114 | |
Exposures associated with the same liability period | |||
β 1 | Liability effect | 0.530 | 0.200 |
Effect estimate | 0.519 | 0.207 | |
Est. Std. Error | 0.011 | 0.080 | |
Simulation Std. Error | 0.011 | 0.080 | |
Absolute bias | 0.013 | 0.063 | |
Coverage | 82% | 94% | |
F-statistic | 96.31 | ||
Conditional F-statistic | 1.06 | ||
No. SNPs | 72 | 86 | |
β 2 | Liability effect | 0.480 | 0.300 |
Effect estimate | 0.474 | 0.288 | |
Est. Std. Error | 0.009 | 0.073 | |
Simulation Std. Error | 0.009 | 0.072 | |
Absolute bias | 0.009 | 0.058 | |
Coverage | 89% | 94% | |
F-statistic | 115.76 | ||
Conditional F-statistic | 1.06 | ||
No. SNPs | 83 | 86 |
N = 150,000, reps = 2000, Direct effect of exposures on the outcome; X1: β1 = 0.2, X2: β2 = 0.3. Effect of X1 on X2 = 0.1. Effect of the liability for each exposure point are given in the table. Absolute bias is the mean value of the absolute bias of the effect estimate across the simulations. For each of Effect estimate, Est. Std Error, F-statistic and Conditional F-statistic mean values across each iteration of the simulation are reported. Simulation Std. Error is the estimated standard error in the effect estimate across the repetitions in the simulation. Coverage gives the proportion of times the true effect estimate falls within the 95%CI, No. SNPs is the mean number of SNPS selected for estimation.