KEY RESOURCES TABLE

REAGENT or RESOURCE	SOURCE	IDENTIFIER
Chemicals, peptides, and recombinant proteins
ATP	GE Healthcare	27-2056-01
Pst1	NEB	R0140
γ-32P-ATP	Perkin Elmer	Blu002Z250uC
Adenosine 5′-diphosphate sodium salt	Sigma-Aldrich	A2754-1G
Micrococcal Nuclease	Worthington	LS004797
Critical commercial assays
Ovation® Ultralow V2 DNA-Seq Library Preparation Kit	Nugen	0344NB-A01
Deposited data
Raw data from MNase Seq experiments	NCBI’s Gene Expression Omnibus	GSE168700
Code to analyze MNase data	Ramani et al., 2019	PMID30811994
Experimental models: Cell lines
S. cerevisiae: INO80-FLAG: s288c INO80-FLAG	Shen, 2004	N/A
S cerevisiae: INO80-FLAG(ΔArp5): s288c INO80-FLAG ΔArp5::KanMX	This paper	N/A
S cerevisiae: INO80-FLAG(Δino80): s288c INO80-FLAG ΔINO80::KanMX	Yao, 2016	N/A
Oligonucleotides
0/40 601 Pst1-18 (Pst1 cut site bolded): CTGGAGAATCCCGGTCTGCAGGCCG CTCAATTGGTCGTAGACAGCTCTAGC ACCGCTTAAACGCACGTACGCGCTGT CCCCCGCGTTTTAACCGCCAAGGGGA TTACTCCCTAGTCTCCAGGCACGTGTC AGATATATACATCCTGTGCATGTATTG AACAGCGACCTTGCCGGTGCCAGTCG GATA	Zhou et al., 2018	N/A
0/100 601 DNA sequence:CTGGAGA ATCCCGGTGCCGAGGCCGCTCAAT TGGTCGTAGACAGCTCTAGCACCG CTTAAACGCACGTACGCGCTGTCC CCCGCGTTTTAACCGCCAAGGGGA TTACTCCCTAGTCTCCAGGCACGTG TCAGATATATACATCCTGTGCATGT ATTGAACAGCGACCTTGCCGGTGC CAGTCGGATAGTGTTCCGAGCTCC CACTCTAGAGGATCCCCGGGTACC GAGCTCGAATTCGCCCTATA	Zhou et al., 2018	N/A
Recombinant DNA
601 plasmid	Lowary and Widom, 1998	N/A
Pet3a_H2A (Xenopus laevis)	Yang et al., 2006	N/A
Pet3a_H2B (Xenopus laevis)	Yang et al., 2006	N/A
Pet3a_H3 (Xenopus laevis)	Yang et al., 2006	N/A
Pet3a_H4 (Xenopus laevis)	Yang et al., 2006	N/A
Software and algorithms
Graphpad Prism 8/9	Graphing and modeling software	https://www.graphpad.com