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. 2022 Jul 25;16(7):e0010128. doi: 10.1371/journal.pntd.0010128

Table 1. Summarising the pairwise ANI, AAI and estimated DDH values of the S. somaliensis and S. sudanensis type strain genomes compared to genomes in GTDB.

Species thresholds are usually defined by ANI >95%, AAI >95% and DDH >70%. Values that fall below these thresholds are highlighted in grey. Results indicate that GTDB GCF_000258695 (annotated as S. somaliensis) is most closely related to S. sudanensis, though it is a different species.

Genome 1 Genome 2 ANI (%) AAI (%) DDH (GGDH)
GTDB S. somaliensis (GCF_012396115) S. somaliensis Type Strain Genome 99.6 99.7 98.4
GTDB S. somaliensis (GCF_012396115) S. sudanensis Type Strain Genome 92.0 90.2 43.3
GTDB S. somaliensis (GCF_000258595) S. somaliensis Type Strain Genome 91.9 89.9 42.2
GTDB S. somaliensis (GCF_000258595) S. sudanensis Type Strain Genome 99.8 99.9 98.5
GTDB S. somaliensis (GCF_000258595) GTDB S. somaliensis (GCF_012396115) 91.79 90.1 43.3