Table 2.
DEGs (Differentially Expressed Genes) in the CRC dataset. The genes that exhibited adjusted p-value of ≤ 0.05 and Log2 Fold Change (LFC) ≥ 2 (two) were considered as DEG in the CRC dataset. DEGs that are also present in the list of salient genes are denoted by (*).
| Genes | LFC | Average expression | t value | p-value | FDR adjusted p-value | B value |
|---|---|---|---|---|---|---|
| GCG | − 2.38358 | 4.969389 | − 15.752 | 6.92E−52 | 1.29E−48 | 107.0804 |
| FOXQ1 | 2.41793 | 9.809112 | 15.58703 | 6.45E−51 | 9.47E−48 | 104.8698 |
| CA1 | − 2.68165 | 7.905425 | − 15.5739 | 7.71E−51 | 1.06E−47 | 104.6939 |
| CEMIP | 2.019388 | 8.943608 | 15.43317 | 5.10E−50 | 6.17E−47 | 102.8227 |
| CLDN8 | − 2.37615 | 4.975604 | − 14.9159 | 4.78E−47 | 3.39E−44 | 96.04866 |
| AQP8 | − 2.20027 | 6.339491 | − 14.6653 | 1.24E−45 | 6.68E−43 | 92.8299 |
| SLC4A4 | − 2.69512 | 6.884806 | − 14.5002 | 1.03E−44 | 4.82E−42 | 90.73028 |
| PKIB | − 2.09604 | 7.226978 | − 13.9028 | 1.91E−41 | 5.58E−39 | 83.28646 |
| MT1M* | − 2.12435 | 6.256335 | − 13.8111 | 5.93E−41 | 1.54E−38 | 82.16609 |
| MS4A12 | − 2.71223 | 6.861364 | − 13.7431 | 1.37E−40 | 3.35E−38 | 81.33784 |
| ZG16 | − 2.74676 | 8.079408 | − 13.6444 | 4.59E−40 | 1.03E−37 | 80.14146 |
| CLCA4 | − 3.05432 | 6.704506 | − 13.5764 | 1.05E−39 | 2.14E−37 | 79.32192 |
| CA2 | − 2.43465 | 8.684428 | − 12.687 | 3.99E−35 | 4.53E−33 | 68.89684 |
| ADH1C | − 2.11602 | 7.314942 | − 11.9071 | 2.59E−31 | 1.71E−29 | 60.22568 |
| SI* | − 2.37608 | 6.102779 | − 11.4662 | 3.02E−29 | 1.51E−27 | 55.52607 |
| PCK1 | − 2.02539 | 8.368289 | − 11.4555 | 3.38E−29 | 1.69E−27 | 55.41363 |
| MMP3 | 2.000444 | 8.471801 | 11.2982 | 1.78E−28 | 8.17E−27 | 53.77398 |
| MMP1 | 2.123265 | 8.813216 | 10.83644 | 2.09E−26 | 7.03E−25 | 49.07185 |
| KRT23 | 2.006019 | 7.476861 | 10.55127 | 3.65E−25 | 1.08E−23 | 46.25175 |
| HEPACAM2 | − 2.06678 | 6.938537 | − 10.292 | 4.65E−24 | 1.23E−22 | 43.74442 |
| CEACAM7 | − 2.10091 | 9.917928 | − 10.0767 | 3.69E−23 | 8.83E−22 | 41.70331 |
| SLC26A3 | − 2.45108 | 9.32326 | − 9.64708 | 2.06E−21 | 3.95E−20 | 37.74335 |
| ITLN1 | − 2.20724 | 7.95737 | − 9.6134 | 2.80E−21 | 5.29E−20 | 37.43937 |
| CLCA1 | − 2.07261 | 8.930104 | − 8.52471 | 3.65E−17 | 4.48E−16 | 28.12584 |