TABLE 2.

Results of ontology matching.

Method	FMA-NCI			FMA-SNOMED			SNOMED-NCI
	P	R	F1	P	R	F1	P	R	F1
AML	0.958	0.910	0.933	0.923	0.762	0.835	0.906	0.746	0.818
LogMap	0.940	0.898	0.919	0.941	0.689	0.796	0.954	0.667	0.785
LogMapBio	0.904	0.920	0.912	0.911	0.711	0.799	0.909	0.696	0.88
MTransE	0.627	0.640	0.633	0.505	0.475	0.490	0.254	0.378	0.304
GCN-align	0.813	0.783	0.798	0.763	0.729	0.746	0.745	0.775	0.760
DAEOM	0.882	0.689	0.774	0.719	0.693	0.706	0.891	0.682	0.773
MEDTO	0.944	0.874	0.908	0.871	0.762	0.813	0.901	0.802	0.849
BioHAN	0.930	0.922	0.926	0.898	0.775	0.832	0.911	0.797	0.850
BioHAN (w/o OB)	0.930	0.922	0.926	0.782	0.731	0.756	0.788	0.709	0.746
BioHAN (w/o HB)	0.831	0.822	0.826	0.771	0.729	0.749	0.850	0.711	0.774
BioHAN (w/o AM)	0.860	0.842	0.851	0.819	0.726	0.770	0.864	0.719	0.785
BioHAN (w/o MN)	0.893	0.849	0.870	0.822	0.745	0.782	0.877	0.701	0.779

Bold values represents the best results for the column in which they are located.