Table 3.
Plasmid replicon and the antimicrobial resistance (AMR) genes harboured in the same contig.
| Isolate | State | Sample origin | Species | AMR genes (n) | Plasmid | Genes carried on the plasmid |
|---|---|---|---|---|---|---|
| AAB060 | Abia | Farm | Goat | 16 | ColRNAI_1 | qnrS1 |
| AAB069 | Abia | Farm | Chicken | 11 | ColRNAI_1 | aph3-Ia + sul2 |
| AAB083 | Abia | Farm | Chicken | 3 | ColRNAI_1 | strA + strB + sul2 |
| AEB011 | Ebonyi | Farm | Sheep | 3 | ColRNAI_1 | strA + strB + sul2 |
| AEB022 | Ebonyi | Farm | Sheep | 8 | ColRNAI_1 | strB + blaTEM-1b + dfrA14 + sul2 |
| AEB025 | Ebonyi | Farm | Human | 8 | ColRNAI_1 | strB + blaTEM-1b + dfrA14 + sul2 |
| AEB071 | Ebonyi | Farm | Chicken | 13 | ColRNAI_1 | strA + strB + sul2 |
| AEB073 | Ebonyi | Farm | Sheep | 13 | ColRNAI_1 | strA + strB + sul2 |
| BEB081 | Ebonyi | Abattoir | Sheep | 10 | ColRNAI_1 | strA + strB + sul2 |
| BEB082 | Ebonyi | Abattoir | Sheep | 8 | ColRNAI_1 | strA + strB + sul2 |
| BEB084 | Ebonyi | Abattoir | Sheep | 8 | ColRNAI_1 | strA + strB + sul2 |
| EN209 | Enugu | Farm | Goat | 11 | ColRNAI_1 | strA + strB + sul2 |
| EN277 | Enugu | Abattoir | Human | 9 | ColRNAI_1 | strB + dfrA14 + sul2 |
| AEB080 | Ebonyi | Farm | Cattle | 7 | IncFIB | blaCTX-M-15 + int2 + qnrS1 |
| AEB083 | Ebonyi | Farm | Cattle | 7 | IncFIB | blaCTX-M-15 + int2 + qnrS1 |
| AEB010 | Ebonyi | Farm | Sheep | 1 | IncFIB | bla CTX-M-15 |
| AEB061 | Ebonyi | Farm | Goat | 8 | IncFIB | bla CTX-M-15 |
| AEB068 | Ebonyi | Farm | Goat | 8 | IncFIB | bla CTX-M-15 |
| BEB051 | Ebonyi | Animal Market | Goat | 8 | IncFIB | bla CTX-M-15 |
| BEB060 | Ebonyi | Abattoir | Goat | 8 | IncFIB | bla CTX-M-15 |
| BEB062 | Ebonyi | Abattoir | Goat | 8 | IncFIB | bla CTX-M-15 |
| BEB066 | Ebonyi | Animal Market | Sheep | 8 | IncFIB | blaCTX-M-15 + qnrS1 |
| AAB114 | Abia | Animal Market | Chicken | 9 | IncFIC | strA + strB + blaTEM-1b + sul2 |
| AAB110 | Abia | Animal Market | Chicken | 9 | IncFII | bla TEM-1b |
| EN235 | Enugu | Farm | Chicken | 6 | IncFII | bla TEM-1b |
| AAB060 | Abia | Farm | Goat | 16 | IncHI2_1 | aac3-IId |
| BEB081 | Ebonyi | Abattoir | Sheep | 10 | IncI1_1_Alpha | aac3-IId + blaTEM-1b |
| AEB068 | Ebonyi | Farm | Goat | 8 | IncN_1 | aadA2 + dfrA12 + int1 + sul3-v1 |
| BEB046 | Ebonyi | Animal Market | Goat | 8 | IncN_1 | aadA2 + dfrA12 + int1 + sul3-v1 |
| BEB049 | Ebonyi | Animal Market | Goat | 8 | IncN_1 | aadA2 + dfrA12 + int1 + sul3-v1 |
| BEB069 | Ebonyi | Animal Market | Sheep | 8 | IncN_1 | aadA2 + dfrA12 + int1 + sul3-v1 |
| BEB140 | Ebonyi | Abattoir | Human | 8 | IncN_1 | int1 + dfrA14 |
| AAB050 | Abia | Farm | Human | 9 | IncQ1_1 | strB + sul2 |
| AAB096 | Abia | Farm | Human | 10 | IncQ1_1 | sul2 |
| AAB121 | Abia | Farm | Pig | 14 | IncQ1_1 | strA + strB + sul2 |
| BEB051 | Ebonyi | Animal Market | Goat | 8 | IncQ1_1 | strA + strB + sul2 |
| BEB055 | Ebonyi | Abattoir | Goat | 8 | IncQ1_1 | strA + strB + sul2 |
| BEB060 | Ebonyi | Abattoir | Goat | 8 | IncQ1_1 | strA + strB + sul2 |
| BEB062 | Ebonyi | Abattoir | Goat | 8 | IncQ1_1 | strA + strB + sul2 |
| EN274 | Enugu | Abattoir | Human | 14 | IncQ1_1 | strA + strB + sul2 |
| EN276 | Enugu | Abattoir | Human | 14 | IncQ1_1 | strA + strB + sul2 |
| BEB048 | Ebonyi | Animal Market | Goat | 8 | IncR_1 | aadA2 + int1 + dfrA12 + sul3-v1 |
| AAB025 | Abia | Abattoir | Cattle | 13 | IncX1_1 | bla CTX-M-55 |
| AAB121 | Abia | Farm | Pig | 14 | IncX3_1 | blaTEM-1b + qnrS1 |
| BEB028 | Ebonyi | Animal Market | Cattle | 8 | IncY_1 | blaCTX-M-15 + strA + strB + blaTEM-1b + dfrA14 + int1 + qnrS1 + int2 + sul2 |
| BEB030 | Ebonyi | Animal Market | Cattle | 8 | IncY_1 | int2 |
| BEB053 | Ebonyi | Abattoir | Goat | 8 | IncY_1 | dfrA14 + int1 |
| EN003 | Enugu | Abattoir | Pig | 8 | IncY_1 | int2 |
| EN219 | Enugu | Animal Market | Goat | 8 | IncY_1 | int2 |
Isolate harbouring a 112 Kb IncFIB blaCTX-M-15 plasmid is given in bold.