Table 1.
SNP | Chr | Position | MAF | Gene | Common allele | Minor allele | Type | Odds ratio (95% CI) | P value |
---|---|---|---|---|---|---|---|---|---|
| |||||||||
rs4784750 | 16 | 57056064 | 0.273 | NLRC5 | G | T | I | 1.38 (1.23–1.54) | 1.56E-8 |
rs16972207 | 13 | 108929066 | 0.185 | TNFSF13B | C | G | I | 1.54 (1.32–1.79) | 3.42E-8 |
rs17564816 | 13 | 108927503 | 0.185 | TNFSF13B | G | A | I | 1.52 (1.31–1.77) | 4.01E-8 |
rs4784751 | 16 | 57056574 | 0.270 | NLRC5 | C | T | O | 1.36 (1.22–1.52) | 4.07E-8 |
rs12444396 | 16 | 57057194 | 0.264 | NLRC5 | G | A | I | 1.36 (1.21–1.52) | 8.43E-8 |
rs12445252 | 16 | 57057679 | 0.264 | NLRC5 | C | T | I | 1.36 (1.21–1.52) | 8.90E-8 |
rs61972007 | 13 | 108918701 | 0.191 | TNFSF13B | A | G | I | 1.42 (1.25–1.62) | 1.37E-7 |
rs61971976 | 13 | 108889127 | 0.216 | TNFSF13B | G | A | I | 1.39 (1.23–1.58) | 1.60E-7 |
rs61971980 | 13 | 108899416 | 0.186 | TNFSF13B | G | A | I | 1.40 (1.23–1.60) | 1.87E-7 |
rs3900097 | 13 | 108905819 | 0.186 | TNFSF13B | C | T | I | 1.40 (1.23–1.60) | 1.88E-7 |
Abbreviations: Chr, chromosome; I, imputed single nucleotide polymorphism; MAF, minor allele frequency; O, originally genotyped single nucleotide polymorphism.