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. 2022 Jul 15;12(7):3223–3241.

Table 1.

The putative target genes of MIR133A1 identified by the transcriptome analysis from the MIR133A1 Knock-in cells and predicted by the bioinformatics tools

Gene Symbol transcript Description Fold change* P-value
1 ABHD16A NM_001177515 abhydrolase domain containing 16A 0.69 0.0322
2 ACAT2 NM_005891 acetyl-CoA acetyltransferase 2 0.59 0.008
3 CALM1 NM_006888 calmodulin 1 (phosphorylase kinase, delta) 0.79 0.0344
4 CDH3 NM_001793 cadherin 3 0.77 0.0449
5 EFNA3 NM_004952 ephrin A3 0.33 0.0007
6 EIF4A1 NM_001416 eukaryotic translation initiation factor 4A1 0.79 0.0289
7 EMP2 NM_001424 epithelial membrane protein 2 0.72 0.0457
8 ENDOD1 NM_015036 endonuclease domain containing 1 0.73 0.0054
9 FOXQ1 NM_033260 forkhead box Q1 0.09 0.001
10 GID8 NM_017896 GID complex subunit 8 homolog 0.74 0.0194
11 GLS2 NM_001280798 glutaminase 2 0.66 0.0202
12 HPGD NM_000860 hydroxyprostaglandin dehydrogenase 15-(NAD) 0.8 0.0334
13 ISOC2 NM_024710 isochorismatase domain containing 2 0.79 0.0391
14 LY6E NM_002346 lymphocyte antigen 6 complex, locus E 0.69 0.0149
15 MRPL35 NM_145644 mitochondrial ribosomal protein L35 0.72 0.0109
16 PFDN2 NM_012394 prefoldin subunit 2 0.72 0.0155
17 POLR2J NM_006234 polymerase (RNA) II subunit J 0.67 0.0361
18 PRPS2 NM_002765 phosphoribosyl pyrophosphate synthetase 2 0.75 0.0001
19 PTPRO NM_030667 protein tyrosine phosphatase, receptor type O 0.42 0.0051
20 REEP6 NM_138393 receptor accessory protein 6 0.74 0.0263
21 SDC1 NM_001006946 syndecan 1 0.7 0.0438
22 SEC61B NM_006808 Sec61 translocon beta subunit 0.79 0.0327
23 SNRPE NM_003094 small nuclear ribonucleoprotein polypeptide E 0.72 0.0302
24 SOX9 NM_000346 SRY-box 9 0.46 0.0035
25 SQLE NM_003129 squalene epoxidase 0.79 0.0094
26 TAGLN2 NM_003564 transgelin 2 0.7 0.0132
27 TCF7 NM_003202 transcription factor 7 0.58 0.0127
28 TIMM17A NM_006335 translocase of inner mitochondrial membrane 17 homolog A (yeast) 0.79 0.0242
29 ZDHHC18 NM_032283 zinc finger DHHC-type containing 18 0.77 0.0215
*

1.25 fold down, P<0.05 & bioinformatics algorithms.