TABLE 1.
Summary of mRNA sequencing datasets.
Samples | M03-15DAP | M03-19DAP | M03-23DAP | M08-15DAP | M08-19DAP | M08-23DAP |
Clean reads | 27,388,559 | 24,866,673 | 26,557,515 | 26,558,540 | 26,303,372 | 28,534,701 |
GC content | 54.79% | 54.96% | 55.45% | 53.96% | 55.39% | 54.90% |
% ≥Q30 | 93.43% | 93.65% | 93.51% | 93.38% | 94.17% | 94.05% |
Mapped reads | 45,702,163 (83.24%) | 40,943,914 (82.33%) | 44,209,451 (83.24%) | 42,832,464 (80.65%) | 44,051,386 (83.74%) | 47,485,183 (83.21%) |
Unique mapped reads | 44,466,465 (81.25%) | 39,867,728 (80.16%) | 42,945,336 (80.86%) | 41,595,125 (78.32%) | 42,777,725 (81.32%) | 46,041,814 (80.68%) |
Multiple mapped reads | 1,235,698 (2.25%) | 1,076,185 (2.16%) | 1,264,116 (2.38%) | 1,237,339 (2.33%) | 1,273,661 (2.42%) | 1,443,369 (2.53%) |