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. 2022 Aug 9;22:394. doi: 10.1186/s12870-022-03772-w

Table 1.

Basic information of LcCCO gene family

LcCOO genes Gene ID
in genome
Genomic
position
Number
of amino
Acids
(aa)
MW (KDa) pI Instability index Aliphatic index Grand
average of
hydropathicity
Subcellular
localization
prediction
LcCCD1 LITCHI004397.m1 Chr14:923,933–940,844 1434 162.43 6.12 35.41 84.62 -0.231 Chloroplast
LcCCDlike-a LITCHI017175.m1 Chr1:43,820,531–43,837,433 1172 131.99 5.54 36.52 75.61 -0.314 Cytoplasm
LcCCDlike-b LITCHI001770.m1 Chr5:30,309,771–30,311,628 359 40.68 5.90 29.50 80.56 -0.179 Cytoplasm
LcCCD4 LITCHI017848.m1 Chr15:133,065–136,343 589 64.70 6.65 42.13 80.44 -0.202 Chloroplast
LcCCD4a1 LITCHI000409.m1 Chr5:11,437,371–11,439,125 584 65.72 7.23 49.31 80.77 -0.142 Chloroplast
LcCCD4a2 LITCHI000415.m1 Chr5;11,580,107–11,582,498 584 65.70 7.23 48.84 82.11 -0.099 Chloroplast
LcCCD4b LITCHI000422.m1 Chr5;11,719,278–11,721,297 577 64.97 8.15 46.41 81.56 -0.182 Chloroplast
LcCCD4c1 LITCHI015832.m1 Chr1;19,365,348–19,366,692 303 34.23 6.37 39.62 80.03 -0.230 Cytoplasm
LcCCD4c2 LITCHI015831.m1 Chr1;19,334,658–19,337,656 566 62.63 6.48 31.10 81.64 -0.277 Chloroplast
LcCCD7 LITCHI006417.m1 Chr11;1,151,592–1,157,255 628 70.57 7.27 49.75 80.51 -0.269 Chloroplast
LcCCD8a LITCHI006516.m1 Chr11;1,903,352–1,906,489 548 61.54 6.28 42.19 76.17 -0.426 Chloroplast
LcCCD8b LITCHI017183.m1 Chr1;43,942,769–43,947,076 566 62.63 6.48 31.10 81.64 -0.277 Mitochondrion
LcNCED1 LITCHI012579.m1 Chr2;12,609,603–12,614,092 596 66.73 6.82 47.43 77.03 -0.389 Chloroplast
LcNCED2 LITCHI028785.m1 Chr9;17,432,409–17,435,810 598 66.85 6.51 43.21 80.87 -0.300 Chloroplast
LcNCED3 LITCHI015114.m1 Chr1;8,869,747–8,872,765 601 67.21 6.95 40.23 82.63 -0.331 Chloroplast