TABLE 4.
Upstream regulator | Activation z-score | B-H corrected p-value | Genes regulated by upstream regulator |
---|---|---|---|
Left ventricle Rbp1−/− vs. left ventricle WT | |||
Bvht | 1.982 | .0403 | Hbb-b2, HBG2, MYH7, SERPINF1 |
Right ventricle Rbp1−/− vs. right ventricle WT | |||
Ifnar | 2.219 | .0354 | B2M, GBP2, ISG15, STAT1, TAPBP |
NRAS | −1.912 | .0238 | AKAP12, B2M, GBP2, ISG15, NPPA, OSBPL1A, PKIA, STAT1 |
HEY2 | −1.956 | .0238 | MYH11, MYL4, MYL7, NPPA |
PNPT1 | −2 | .0354 | GBP2, GBP6, ISG15, STAT1 |
STAT6 | −2.087 | .0093 | APOE, COBLL1, FASN, GBP2, GBP6, Ighg2b, ISG15, LIFR, PDK4, PLBD1, RAB35, SERPINA1, SERPINF1 |
WT right ventricle vs WT left ventricle | |||
GATA1 | 2.397 | .012 | Ahsp, ALOX12, GP1BA, GP1BB, GP9, Hbb-b2, NHP2, PF4, SNCA, TGFB1I1 |
FLNA | 1.964 | .0072 | GP1BA, GP1BB, GP9, ITGB1 |
Rbp1−/− right ventricle vs Rbp1−/− left ventricle | |||
GATA1 | 2.575 | .0006 | Ahsp, ALOX12, CNN3, GP1BA, GP1BB, GP9, Hbb-b2, NHP2, NPPA, PF4, PLEK, TGFB1I1 |
Note: Criteria for upstream regulator interference were a nonzero absolute activation z-score and a Benjamini-Hochberg corrected Fisher’s exact test p-value < .01.