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. Author manuscript; available in PMC: 2022 Aug 10.
Published in final edited form as: Cell Rep. 2022 Jul 12;40(2):111040. doi: 10.1016/j.celrep.2022.111040

Table.

Hyperparameters for the automated RGC classifier

Parameter Algorithm level Optimized value Optimization range
Number of features elastic net 54 5 to 100
Number of folds elastic net 6 2 to 10
Alpha elastic net .326 0.0 to 1.0
Number of lambda values elastic net 6 5 to 50
Number of repetitions decision node 5 5 to 20
Minimum size decision node 13 5 to 100
Maximum depth decision tree 6 2 to 8
Minimum tree count adaboost forest 76 20 to 100
Maximum tree count adaboost forest 95 25 to 100
Stopping criterion adaboost forest 1.44% improvement over last 44 trees 1% to 50% improvement over last 10 to 50 trees
Ensemble size ECOC 96 32 to 100
Probability of ensemble membership ECOC 22.2% in positive class, 38.2% in negative class, 60.4% null 10% to 90% in positive/negative class