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. 2022 Aug 4;30(8):1098–1108.e6. doi: 10.1016/j.str.2022.05.007
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse monoclonal antibody 24-60 (anti-human IGF-1R) (Soos et al., 1992) N/A
Mouse monoclonal antibody 83-7 (anti-human IR) (Soos et al., 1986) N/A
Mouse monoclonal antibody 18-44 (anti-human IR) (Soos et al., 1986) N/A
Mouse monoclonal antibody 9E10 (anti-c-myc) CSIRO Laboratories, Parkville, Australia ATCC CRL1729
IRDye 800CW Goat anti-mouse IgG LI-COR Biosciences Cat# 926-32210; RRID: AB_621842

Chemicals, peptides, and recombinant proteins

9E10 c-myc epitope peptide, sequence EQKLISEEDL (>75% purity) Genscript N/A
18-44 IR epitope peptide, sequence TSPEEHRPFE (>70% purity) Genscript N/A
Receptor grade IGF-I GroPep Cat# CM001
IGF-I (King et al., 1992) N/A
Eu-IGF-I (Denley et al., 2004) N/A
Insulin Novo Nordisk Actrapid
Fetal calf serum Scientifix FBSFR-62147A
G418 ThermoFisher Scientific 10131035
Puromycin ThermoFisher Scientific A1113802
L-Methionine sulfoximine Merck GSS-1015-F
Eu-N1-ITC chelate Perkin Elmer 1244-302
DELFIA Enhancement Solution Perkin Elmer 1244-104
Fetal Bovine Serum, dialyzed ThermoFisher Scientific 30067344
DMEM with Glucose, without L-Glutamine Lonza 12-614F
GS Supplement Merck GSS-1016-C
Trypsin Gold Promega Cat# V5280
FuGENE HD transfection agent Promega E2311
ProSep-vA resin Millipore

Deposited data

Crystal structure of apo IGF-1R ectodomain (Xu et al., 2018) PDB: 5U8R
Crystal structure of apo IR ectodomain (Croll et al., 2016) PDB: 4ZXB
CryoEM structure of IGF-II bound IGF-1R (head region; open conformation (Xu et al., 2020) PDB: 6VXG
Model: IGF-I-bound HybZip, head region This study PDB: 7S0Q
Model: IGF-I-bound HybZip, leg region This study PDB: 7S8V
Map: IGF-I-bound HybZip, head region This study EMD-24791
Map: IGF-I-bound HybZip, leg region This study EMD-24927

Experimental models: Cell lines

BALB/c3T3 cells overexpressing IGF-IR (Pietrzkowski et al., 1992) P6
IGF-IR null mouse fibroblasts overexpressing the human IR-B In-house; (Denley et al., 2004) R-IR-B
CHO-Lec8 ATCC ATCC CRL-1737

Recombinant DNA

IGF-1Rzip (Xu et al., 2020) N/A
IR-Bzip, custom synthesis and cloning Genscript N/A
pEE14 vector Lonza N/A
pJ509 vector DNA 2.0 N/A
oligo 5'-GCGCGTCGACGCCT
CCTTCAAGTCCCAG-3'
Integrated DNA Technologies N/A
oligo 5'-GCGCTCTAGATTATT
AATTCAGATCCTC-3'
Integrated DNA Technologies N/A

Software and algorithms

RELION v3.0.5 (Nakane et al., 2018) https://www3.mrc-lmb.cam.ac.uk/relion
CryoSPARC v2.11 (Punjani et al., 2017) https://cryosparc.com/
ISOLDE v1.03b (Croll, 2018) https://isolde.cimr.cam.ac.uk/
Phenix v1.16-3549-000 (Afonine et al., 2018) https://www.phenix-online.org/
Coot v0.8.9.1 (Emsley et al., 2010) https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
Chimera v1.11.2 (Pettersen et al., 2004) https://www.cgl.ucsf.edu/chimera/
ChimeraX v0.91 (Goddard et al., 2018) https://www.cgl.ucsf.edu/chimerax/
Graphpad Prism v9.0.0 Graphpad Software https://www.graphpad.com/scientific-software/prism/

Other

Mini-Leak low divinylsulphone-activated resin Kem-en-Tec Cat# 1011 H
Sepharose CL-4B resin GE Healthcare Lifesciences Cat# 17015001
Sephadex-G75 GE Healthcare / Cytiva Cat# 17005001
Pellicon 3 0.11 m2 10 kDa Ultracel concentrator Merck-Millipore Cat# P3C010C01
Superdex 200 Increase 10/300 GL GE Healthcare Lifesciences Cat# 28990944
0.5 mL 10 kDa Amicon Ultra concentrator Sigma-Aldrich Cat# UFC501008
UltrAuFoil R1.2/1.3 300-mesh grids Quantifoil N/A
Pelco easiGlow Ted Pella Cat# 91000S-230
Vitrobot mark IV ThermoFisher Scientific N/A