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. 2022 Jan 11;101:1–56. doi: 10.3114/sim.2022.101.01

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© 2022 Westerdijk Fungal Biodiversity Institute

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/bync-nd/4.0/).

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Fig. 4. — Maximum likelihood phylogenomic tree generated from a concatenated alignment of sets of orthologous protein sequences. A total of 1 893 single-copy orthologs were retained. The tree was estimated based on the JTT substitution model. Ex-type strains are indicated with “*” in the end of the taxa labels. Genome and assembly features are shown at the right side of the phylogenetic tree. From left to right: Genomes (Mb): genome size in Mb; Genes: number of predicted genes; Repeat sequences (Mb): genome sizes showing proportion of repeat elements in these genomes; Eggnog annotated genes: number of predicted protein coding genes with and without functional annotation based on eggnog database; CAZymes: gene number with the distribution of CAZyme classes, auxiliary activities (AA), carbohydrate binding molecules (CBM), carbohydrate esterases (CE), glycoside hydrolases (GH), glycosyl transferases (GT), polysaccharide lyases (PL); Effectors & transporters: number of predicted effectors and transporters.