Skip to main content
. Author manuscript; available in PMC: 2023 Jul 15.
Published in final edited form as: J Immunol. 2022 Jun 27;209(2):227–237. doi: 10.4049/jimmunol.2100558

Table I:

Genetic variation between C57BL/6 Reference and NOD/ShiLtJ strains within and +/− 1kb of Nfkbid (Chr 7: 30,120,157–30,129,171 (GRCm39))

Variant ID Variant Class Predicted Consequence B6 NOD
rs3147809 SNP upstream gene variant T C
rs3142468 SNP upstream gene variant A G
rs8261832 SNP intron variant A G
rs3147847 SNP intron variant T G
rs3142508 SNP intron variant C T
rs3147846 SNP synonymous variant T C
rs3147845 SNP intron variant G A
rs3142506 SNP intron variant G A
rs3147844 SNP synonymous variant T A
rs3142505 SNP intron variant A G
rs3142504 SNP intron variant G A
rs3147843 SNP intron variant C T
rs3147842 SNP intron variant C T
rs8261873 insertion intron variant - T
rs3142503 SNP intron variant G C
rs586927013 SNP intron variant G A
rs258934926 SNP intron variant T C
rs3142502 SNP intron variant G A
rs3142501 SNP intron variant A T
rs258679767 deletion splice region variant C -
rs3147840 SNP synonymous variant C T
rs3147839 SNP synonymous variant G A
rs3147838 SNP intron variant C T
rs3142500 SNP non coding transcript exon variant G T
rs585933734 SNP non coding transcript exon variant G A
rs3147837 SNP intron variant C T
rs3142498 SNP intron variant A G
rs3147836 SNP intron variant C T
rs3147835 SNP intron variant C G
rs3147834 SNP intron variant T C
rs3142497 SNP intron variant G A
rs3142496 SNP intron variant C T
rs3142495 SNP intron variant T G
rs3142494 SNP synonymous variant A G
rs3142493 SNP intron variant A G
rs252747946 SNP intron variant G C
rs225186782 SNP intron variant G A
rs46738579 SNP intron variant T G
rs8261888 SNP intron variant C T
rs8261887 SNP intron variant C G
rs8261886 SNP intron variant T C
rs8261885 SNP intron variant G A
rs32265778 SNP intron variant A T
rs263326630 deletion intron variant TGATCTTAAATG -
rs3142492 SNP splice region variant C T
rs3147832 SNP 3' UTR variant C T
rs3142491 SNP 3' UTR variant G A