Table II:

Geneset comparison of NF-κB target genes exhibiting differential expression in Nfkbid-ablated or -transgenic DP thymocytes compared to NOD-AI4 controls

Shared between NOD-AI4-60A or NOD-AI4-Nfkbid−/− vs. NOD-AI4			Unique to NOD-AI4-60A vs. NOD-AI4				Unique to NOD-AI4-Nfkbid−/− vs. NOD-AI4
	Fold Change
Gene	Transgenic vs NOD-AI4	Ablated vs NOD-AI4	Gene	Fold Change	Gene	Fold Change	Gene	Fold Change
Tgfb1	15.771	8.257	Csf2rb	10.951	Fscn1	2.665	Dnase1l3	4.190
Wdfy4	9.071	7.193	Pax5	9.950	Apol7e	2.650	Phldb1	3.696
Cd74	7.741	5.108	Myadm	9.702	Ncf1	2.632	Hunk	3.610
Ccl22	4.457	2.693	Casp1	7.592	Rarg	2.601	Acan	2.786
Pde2a	3.991	3.570	Serpina3g	7.176	S1pr1	2.456	Ptpn13	2.742
Miuc20	3.811	3.121	Spib	6.527	B2m	2.382	Slc45a3	2.598
Fads2	3.295	2.556	C3	6.523	Gbp2	2.376	Heyl	2.441
Mettl1	2.986	2.585	Nfkbid	6.208	Cfb	2.351	Gsto1	2.226
Adam19	2.668	2.204	Csf1r	5.738	Cd72	2.341	Oaf	2.103
Gpr25	2.557	2.017	Ccl5	5.703	Il15ra	2.301	Tshz3	2.081
Il7r	2.534	3.438	Cd180	5.616	Psmb9	2.179	Jdp2	2.057
Hk2	2.190	2.256	Tyrobp	5.374	Acsbg1	2.144	Pde8a	2.018
Ifit3	4.334	−3.076	Pltp	5.017	Ccnd2	2.121	Cyp2t4	−3.050
Bcl3	4.219	−2.430	Napsa	4.885	Chst3	2.074	Avil	−2.326
Ifit1	3.370	−2.717	Nuak2	4.282	Asph	2.058	Stac3	−2.051
Spry1	−2.084	−2.051	Btg3	3.754	Oas1b	2.053
Serpinf2	−2.139	−2.338	Ddx60	3.666	Tmem176b	2.019
Zfp651	−2.305	−2.525	Rab44	3.628	H2-Q9	2.013
Gpd1	−2.400	−2.107	Coro2a	3.553	Enpp1	2.012
Dusp1	−2.576	−2.274	Zeb2	3.096	Rsph1	−2.510
Junb	−2.889	−2.908	Lilrb3	2.934	Fzd3	−2.343
Klf4	−3.592	−3.500	Mctp2	2.921	Smoc1	−2.196
Ppp1r15a	−4.826	−4.069	Dhx58	2.899	Rimkla	−2.170
FosB	−9.715	−4.218	Ppfia4	2.881	Kl	−2.170
Tulp2	−10.933	−9.098	Rassf4	2.860	Rtkn	−2.142
Fos	−13.609	−8.465	Epsti1	2.854	Camk2n1	−2.104
			Bst2	2.797	Odf3b	−2.072
			Xaf1	2.683	Shank3	−2.068
			Gm6034	2.682	Tmem88	−2.006