Fig. 11.

Posterior means and 95% HPD CIs for 16 parameter in the MSC model on species tree 1 for the gibbons (fig. 7) using different priors. The prior is specified as follows, as in figure 9: locusrate = 1 0 0 5 iid, clock = 2 ${\alpha }_{\overline{\nu }}{\beta }_{\overline{\nu }}$ 5 iid G, with $({\alpha }_{\overline{\nu }},{\beta }_{\overline{\nu }})=(1,100)$, (2, 200), (10, 1000), (1, 10), (2, 20), (10, 100), (1, 1), (2, 2), and (10, 10). Estimates of $\tau$ and $\theta$ are multiplied by ${10}^3$.