Table I.
Summary of the germline (1st-hit) and postzygotic somatic (2nd-hit) pathogenic variants in the MVD gene identified in patients with linear porokeratosis and porokeratosis plantaris, palmaris et disseminata
Patient | Sex | Age, years | Age of onset | SCC development | 1st hit (germline) | Biopsy (phenotype) | 2nd hit (somatic) | Number of reads |
---|---|---|---|---|---|---|---|---|
1 | Male | 84 | Preschool age | – |
MVD c.70+5G>A heterozygous |
Left side of thorax (LP)_1 Left side of thorax (LP)_2a Right upper arm (Disseminated) |
ND LOH ND |
– Coverage: 189x Ref.: 67x (35%) Alt.: 122x (65%) – |
2 | Male | 74 | Babyhood (soon after birth) | + |
MVD c.70+5G>A heterozygous |
Left thigh (LP) | LOH | Coverage: 614x Ref.: 201x (33%) Alt.: 412x (67%) |
3 | Female | 54 | Childhood | – |
MVD c.70+5G>A heterozygous |
NA | ||
4 | Female | 9 | At birth | – |
MVD c.70+5G>A heterozygous |
Arm (LP) | LOH | Coverage 2350x Ref.: 826x (35%) Alt.: 1524x (65%) |
5 | Male | 65 | 18 | – |
MVD c.70+5G>A heterozygous |
Fibular plantar area, caudal (PPPD) Fibular plantar area, cranial (PPPD) |
LOH LOHb |
Coverage: 43x Ref.: 16x (37%) Alt.: 27x (63%) Coverage: 408x Ref.: 184x (45%) Alt.: 224x (55%) |
6 | Female | 27 | 7 | – |
MVD c.70+5G>A heterozygous |
Fibular plantar area (PPPD) | ND | – |
7 | Male | 73 | 13 | – | MVD c.70+5G>A heterozygous |
Fibular plantar area (PPPD) Left side of abdomen (PPPD) |
LOH ND |
Coverage 204x Ref.: 46x (23%) Alt.: 158x (77%) – |
Curettage of the lesion.
Presumably minimal loss of heterozygosity (LOH).
SCC: squamous cell carcinoma; NA: not available; ND: not detected; Ref.: Reference allele G; Alt.: alternative allele A. The number and percentages of reads with the alternative allele A are given in bold.