Table 2. Type of H-bond, β-Bend, Thermodynamic Properties, and Population of 11 Local Minima for the Neutral Leu-EnK Calculated at the DSD-PBEP86-D3BJ/def2-TZVP//M06-2X/6-31+G(d) Level of Theory in the Gas Phasea.
| conf. | H-bond typeb | β-bendc | ΔEd | ΔHe | ΔGf | wg |
|---|---|---|---|---|---|---|
| n01 | OH1 → 3, 4 → 2, OH5 → 1 | 0.00 | 0.00 | 0.00 | 63.6 | |
| n02 | OH1 → 3, 4 → 2, 5 → 2, OH5 → 1 | βII′34 | 2.48 | 2.55 | 1.18 | 8.6 |
| n03 | OH1 → 3, 4 → 2, OH5 → 1 | 1.95 | 2.07 | 1.23 | 7.9 | |
| n04 | OH1 → 3, 4 → 2, OH5 → 1 | 2.06 | 2.09 | 1.25 | 7.7 | |
| n05 | OH1 → 3, 4 → 2, OH5 → 1 | 2.79 | 3.03 | 1.83 | 2.9 | |
| n06 | OH1 → 3, 4 → 2, OH5 → 1 | 1.86 | 1.97 | 1.85 | 2.8 | |
| n07 | OH1 → 3, 4 → 2, OH5 → 1 | 0.47 | 0.70 | 2.19 | 1.6 | |
| n08 | OH1 → 3, 4 → 2, OH5 → 1 | 3.74 | 3.93 | 2.25 | 1.4 | |
| n09 | OH1 → 3, 4 → 2, OH5 → 1 | 4.20 | 3.95 | 2.44 | 1.0 | |
| n10 | OH1 → 3, 4 → 2, OH5 → 1 | 1.47 | 1.80 | 2.74 | 0.6 | |
| n11 | OH1 → 3, 4 → 2, OH5 → 1 | 2.96 | 3.02 | 2.90 | 0.5 |
Torsion angles (°) are listed in Table 1. Only 11 local minima with the relative Gibbs free energy (ΔG) < 3 kcal mol–1 are listed.
Each H-bond type n → m stands for the H-bond between the H donor (e.g., the amide H atom for backbone) of the residue n and the H acceptor (e.g., the carbonyl O atom for backbone) of the residue m. In addition, OH1 and OH5 represent the hydroxyl H atom of the side chain of the Tyr1 residue and the carboxylic H atom of the Leu5 residue, respectively. 5OH represents the O atom of the carboxylic OH group of the Leu5 residue.
βII′34 stands for the type II′ β-bend at the Gly3–Phe4 sequence, which is stabilized by the 5 → 2 H-bond.
Relative electronic energies in kcal mol–1.
Relative enthalpies in kcal mol–1 at 25 °C.
Relative Gibbs free energies in kcal mol–1 at 25 °C and 1 atm.
The population of each conformer was calculated by its ΔG at 25 °C.