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. 2022 Jul 26;7(31):27755–27768. doi: 10.1021/acsomega.2c03942

Table 4. Type of H-Bond, β-Bend, and Thermodynamic Properties of Local Minima for the Neutral Leu-EnK Optimized from the Structures Obtained by the ECEPP Force Field and DFT Methods at the DSD-PBEP86-D3BJ/def2-TZVP//M06-2X/6-31+G(d) Level of Theory in the Gas Phaseah.

conf.b H-bond typec β-bendd ΔEe ΔHf ΔGg
ECEPP3-1 OH1 → 4, 4 → 3, OH5 → 1   10.64 10.61 9.46
ECEPP3-2 OH1 → 4, 4 → 3, OH5 → 1   10.50 10.93 8.85
ECEPP3-3 OH1 → 4, 4 → 3, OH5 → 1   11.94 11.86 11.31
ECEPP3-4 OH1 → 4, 2 → 5, 3 → 1, 5 → 2 βII′34 10.32 10.72 11.25
ECEPP3-5 OH1 → 3, 4 → 1 βII′23 17.75 17.47 15.62
ECEPP3-6 OH1 → 4, 2 → 5, 3 → 1, 4 → 2, 5 → 2 βII′34 4.22 4.57 4.76
ECEPP3-7 OH1 → 4, 4 → 2, OH5 → 1   8.89 8.85 6.60
ECEPP3-8 4 → 1 βII′23 20.59 19.97 17.65
ECEPP3-9 OH1 → 3, 2 → 5, 4 → 3   6.90 6.92 5.88
MM1 OH1 → 3, 2 → 5, 4 → 2, 5 → 2 βII′34 7.24 7.44 5.11
MM2 OH1 → 3, 4 → 1 βII′23 17.75 17.47 15.62
MM3 1 → 4, 3 → 1   17.69 17.45 13.78
MM4 1 → 4, 3 → 1   17.08 16.72 14.30
VG 2 → OH5, 5 → 2 βII′34 11.50 11.32 7.42
J1 1 → 4, 4 → 1, 5 → 3, OH5 → 4 βI′23 13.99 14.18 12.16
J2 1 → 4, 4 → 1, 5 → 3 βI′23 13.70 13.62 10.73
J3 4 → 1, 5 → 3, OH5 → 4 βI′23 11.59 11.22 9.39
WH1 OH1 → 3, 4 → 1 βI′23 12.23 12.31 10.61
WH2 OH1 → 4, 4 → 1 βII′23 11.60 11.41 9.26
WH3 OH1 → 3   18.08 17.58 13.52
a

Torsion angles (°) are listed in Table 3.

b

The definition of conformations is noted in footnotes be of Table 3.

c

Each H-bond type nm stands for the H-bond between the H donor (e.g., the amide H atom for backbone) of the residue n and the H acceptor (e.g., the carbonyl O atom for backbone) of the residue m. In addition, OH1 and OH5 represent the hydroxyl H atom of the side chain of the Tyr1 residue and the carboxylic H atom of the Leu5 residue, respectively. 5OH represents the O atom of the carboxylic OH group of the Leu5 residue.

d

βII′23 and βI′23 stand for the type II′ and I′ β-bend at the Gly2–Gly3 sequence, which are stabilized by the 4 → 1 H-bond. βII′34 stands for the type II′ β-bend at the Gly3–Phe4 sequence, which is stabilized by the 5 → 2 H-bond.

e

Relative electronic energies in kcal mol–1.

f

Relative enthalpies in kcal mol–1 at 25 °C.

g

Relative Gibbs free energies in kcal mol–1 at 25 °C and 1 atm.

h

The population of each conformer was calculated by its ΔG at 25 °C.