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. 2022 Jul 27;14(15):3656. doi: 10.3390/cancers14153656

Table 2.

Details of included studies.

Disease Study [Ref] Total
Cohort #
Validation CD8
Evaluation
Joint
Analysis
Imaging Modality Radiomics
Software
Features
Extracted
Tumour
Region
Relevant Radiomic
Signatures
Modelling End Point
R S SQ # Features
Lung NSCLC Lopci et al. [47] 55 N IHC N PET ([18F]-FDG) NA N N Y Intratumoural 2 SQ: SUVmean, SUVmax Cox regression DFS
NSCLC Castello et al. [48] 44 N IHC N PET ([18F]-FDG) LIFEx Y N Y Intratumoural 5 R: First-order
SQ: SUVmax, SUVpeak, SUVmean, MTV
Cox regression DFS
NSCLC Mazzaschi et al. [42] 100 Y IHC Y
(CD3,
PD-1)
CT SlicerRadiomics Y Y N Intratumoural 11 R: First-order, GLCM, GLRLM, GLDM
S: Texture, effect (parenchyma reaction), margins
Cox regression OS, DFS
NSCLC Mitchell et al. [49] 59 N IHC N PET ([18F]-FDG) NA N N Y Intratumoural 0 None significant Cox regression OS, DFS
NSCLC Zhou et al. [45] 91 N IHC Y
(PD-L1)
PET ([18F]-FDG) NA N N Y Intratumoural 5 SQ: SUVmax, SUVmean, TLG Logistic regression Tumour immuno-
phenotype
NSCLC Min et al. [37] 97 Y FACS N CT PyRadiomics Y Y N Intratumoural 4 R: GLCM, GLDM
S: Boundary type, lymphatic metastasis
Neural network-based High/low CD8 levels
NSCLC Zhou et al. [46] 103 Y IHC Y
(PD-L1)
PET/CT ([18F]-FDG) LIFEx Y N Y Intratumoural 1 R: NGLDM Logistic regression Tumour immuno-phenotype
Hepatobiliary PDAC Li et al. [54] 184 Y IHC N CE-CT PyRadiomics Y Y N Intratumoural 11 R: First-order, GLSZM
S: Tumour size
Logistic regression, XGBoost High/low CD8 levels
PDAC Bian et al. [55] 156 Y IHC N MRI (T1W, T2W, post-contrast [AP PPP, PVP]) PyRadiomics Y Y N Intratumoural 14 R: First-order, GLCM, GLRLM, GLSZM, NGTDM
S: Lesion location, tumour size
Linear regression, XGBoost High/low CD8 levels
PDAC Bian et al. [56] 144 Y IHC N MRI (T1W, T2W) PyRadiomics Y Y N Intratumoural 13 R: First-order, GLCM, GLRLM, GLSZM LDA classifier High/low CD8 levels
HCC Chen et al. [43] 207 Y IHC Y
(CD3)
MRI (CE) Analysis Kit (GE Healthcare) Y N N Intratumoural, peritumoural, combined 70 R: Shape, GLCM, GLRLM, GLSZM Extra-Trees, logistic regression Immunoscore prediction
HCC Liao et al. [57] 142 Y IHC N CE-CT Analysis Kit (GE Healthcare) Y N N Intratumoural 7 R: GLCM, GLRLM Elastic-net OS, DFS
ICC Zhang et al. [58] 78 N IHC N MRI (T1W, T2W, post-contrast [AP, PVP], DW) PyRadiomics Y N N Intratumoural 4 R: Shape, first-order, GLSZM Logistic regression, Cox regression Tumour immuno-phenotype, OS
Brain LGG Zhang et al. [38] 107 Y TIMER N MRI (T1W, T1CE, T2W, T2-FLAIR) CaPTK Y N Y Multiple subregions 3 R: Shape, GLRLM Cox regression OS
GBM Hsu et al. [59] 116 Y RNA-seq N MRI (T1CE, DW) ND Y N N Intratumoural 15 R: First-order, GLRLM Logistic regression High/low CD8 levels
HGG Kim et al. [36] 51 N FACS Y
(CD4)
MRI (T1W, T1CE, T2W, T2-FLAIR, DW, DSC) PyRadiomics Y N N Intratumoural 5 R: GLCM, GLRLM, GLSZM, GLDM sPLS-DA OS
Glioma Chaddad et al. [40] 151 Y CIBERSORT N MRI (T1W, T1CE, FLAIR, T2W) MATLAB Y Y N Intratumoural 3 R: GLSZM Neural network-based High/low CD8 levels
Gastrointestinal Gastric cancer Jiang et al. [44] 1778 Y IHC Y
(CD3, CD45RO, CD66b)
CE-CT MATLAB Y N N Intratumoural, peritumoural 13 R: Shape, GLCM, GLRLM, GLSZM, NGTDM Logistic regression, Cox regression Immunoscore prediction, DFS, OS
ESCC Wen et al. [60] 220 Y IHC N CE-CT IBEX Y N N Intratumoural 8 R: First-order, GLCM, GLRLM Logistic regression High/low CD8 levels
Rectal cancer Jeon et al. [61] 113 Y IHC N MRI (T2W) MATLAB Y N N Intratumoural 6 R: First-order, GLCM, GLRLM, GLSZM Linear regression Chemoradiotherapy-induced changes
Head and neck HNSCC Katsoulakis et al. [52] 160 Y RNA-seq N CE-CT Radiomics Toolbox in CERR Y N N Intratumoural 67 R: First-order, GLCM, GLRLM, GLSZM, NGTDM, NGLDM Random forest High/low CD8 levels
HNSCC Wang et al. [41] 71 Y Chemokine gene expression N CE-CT SlicerRadiomics Y N N Intratumoural 8 R: GLCM, GLSZM, GLDM, NGTDM Logistic regression Tumour immuno-phenotype
Multiple Multiple Sun et al. [51] 491 Y RNA-seq N CE-CT LIFEx Y Y N Intratumoural, peritumoural 8 R: First-order, GLRLM
S: Lesion location (adenopathy; head and neck), CT parameters (kVp)
Elastic-net Objective response, OS
Multiple Ligero et al. [53] 198 Y IHC N CE-CT PyRadiomics Y Y N Intratumoural 16 R: Shape, first-order, GLCM, GLDM
S: Lesion location (liver; other)
Elastic-net, Cox regression Objective response, OS
Others Breast cancer Arefan et al. [39] 73 Y MCP-Counter N MRI (DCE) PyRadiomics Y N Y Intratumoural 2 R: Shape
SQ: Tumour mean peak enhancement
XGBoost High/low CD8 levels
UPS Toulmonde et al. [62] 14 N IHC; RNA-seq N MRI (T1CE) OleaSphere® Software Y N N Intratumoural 9 R: First-order, GLRLM Cox regression OS, MFS
Melanoma Aoude et al. [50] 52 N RNA-seq; mIF; Histomorphometry N PET/CT ([18F]-FDG) NA Y N Y Intratumoural 1 R: First-order Cox regression OS, PFS

Acronyms: AP = arterial phase; CaPTK = cancer imaging phenomics toolkit; CE = contrast-enhanced; CE-CT = contrast-enhanced CT; CERR = computational environment for radiological research; CIBERSORT = cell-type identification by estimating relative subsets of RNA transcript; DCE = dynamic contrast-enhanced; DFS = disease-free survival; DSC = dynamic susceptibility contrast-enhanced; ESCC = esophageal squamous cell carcinoma; Extra-Trees = extremely randomized tree algorithm; FACS = fluorescence-activated cell sorting; GBM = glioblastoma; HCC = hepatocellular cancer; HGG = high-grade glioma; HNSCC = head and neck squamous cell carcinoma; ICC = intrahepatic cholangiocarcinoma; IHC = immunohistochemistry; kVp = peak kilovoltage; LDA = linear discriminant analysis; LGG = lower-grade glioma; MCP-counter = microenvironment cell populations-counter; MFS = metastasis-free survival; mIF = multiplex immunofluorescence; N = no; NA = not available/applicable; ND = not declared; NSCLC = non-small cell lung cancer; OS = overall survival; PDAC = pancreatic ductal adenocarcinoma; PFS = progression-free survival; PPP = pancreatic parenchymal phase; PVP = portal venous phase; R = radiomic features; RNA-seq = RNA sequencing; S = semantic features; sPLS-DA = sparse partial least squares discriminant analysis; SQ = semi-quantitative features; SSF = spatial scaling factor; T1-FLAIR = T1-weighted fluid attenuated inversion recovery; T1CE = T1-weighted contrast-enhanced; T1W = T1-weighted; T2-FLAIR = T2-weighted fluid attenuated inversion recovery; T2W = T2-weighted; TIMER = tumour immune estimation resource; UPS = undifferentiated pleomorphic sarcoma; XGBoost = binary logistic extreme gradient boosting framework; Y = yes.