Table 3.
Comparison of identification results between the MALDI and 16S rRNA techniques.
Identification by MALDI | 16S rRNA Identification | Number in PCM ** | |||
---|---|---|---|---|---|
Identification Result | MSP Log Score * | Identification Result | % Similarity | Strand Length (bp) | |
Lactococcus lactis ssp lactis 3C1_QSA IBS | 2.02 |
Lactococcus lactis strain NBRC 100933 [NR_113960.1] Lactococcus lactis strain NCDO 604 [NR_040955.1] |
99.86 99.86 |
1412 | L. lactis Beet 1 [OM957496] |
Weissella cibaria DSM 15878T DSM | 2.13 |
Weissella cibaria strain II-I-59 [NR_036924.1] Weissella confusa strain JCM 1093 [NR_040816.1] |
99.58 99.17 |
1442 | W. cibaria Beet 2 [OM957500] |
* log score >2.00—secure genus identification, probable species identification. ** PCM—Polish Collection of Microorganisms.