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. Author manuscript; available in PMC: 2022 Aug 11.
Published in final edited form as: J Med Chem. 2001 Sep 13;44(19):3092–3108. doi: 10.1021/jm010082h

Table 3.

Distances in Angstroms between Pharmacophoric Points of P2Y1 Docked Antagonists and Template Compound 2a

compd 3′-P 5′-P 6-N
92 0.35 0.36 0.05
93 0.28 1.88 0.20
5 0.42 0.79 1.27
7 0.38 0.50 0.27
4 0.42 1.08 0.49
94 0.33 2.22 0.7
12 0.44 1.78 0.43
13 0.45 0.83 1.24
14 0.45 1.40 0.46
15 0.16 0.42 0.25
16 0.50 0.86 0.21
17 0.27 1.60 0.30
18 isomer 1 0.78 0.72 0.50
isomer 2 0.27 1.31 0.27
19 R-config 0.10 0.81 0.15
S-config 0.15 0.83 0.21
20 R-config 0.26 0.63 0.18
S-config 0.08 0.54 0.10
a

Compound 2 (MRS 2279) is (1R,2S,4S,5S)-1-[(phosphato)-methyl]-4-(2-chloro-6-methylaminopurin-9-yl)bicyclo [3.1.0]-hexane-2-phosphate. Compounds are grouped as cyclic template compounds (92, 93), acyclic bisphosphates of variable chain length (0–3 methylenes) (5, 7 (MRS 2298), 4, 94), other acyclic compounds (12-15), and cyclopropyl derivatives (16-20). Compounds 92 (2′-deoxy-2-chloro-N6-methyladenosine-3′,5′-bisphosphate (MRS 2216), IC50 0.206 μM), 93 (phosphoric acid mono-[3-(2-chloro-6-methylaminopurin-9-yl)-2-phosphonooxymethylcyclobutyl] ester (MRS 2264), IC50 0.805 μM), and 94 (2-[3-(6-methylaminopurin-9-yl)-propyl]propane-1,3-bisphosphate, IC50 >30 μM) were reported previously.19,20