TABLE 4.
Apparent binding constants (Kapp) for the three KorB operators studied in vitro in the absence or presence of IncC at 150 nM
| Operator (name/location) | Sequence of operator plus flanking sequencesa |
Kappb (nM) for:
|
|
|---|---|---|---|
| KorB | KorB plus IncC | ||
| OB1 (korAp) | ACACCTTTAGCCGCTAAAACTCGTCC | 7.5 | 2.5 |
| OB2 (kfrAp) | GGTTTTTTAGCGGCTGAAGGGCAGGC | 100 | 20 |
| OB10 (trfAp/trbAp) | AGAACTTTAGCGGCTAAAATTTTGCG | 2.5 | <1 |
Kapp was calculated as the protein concentration at which 50% of the radioactivity in the unretarded band has moved to a more slowly moving species as quantified by phosphorimager analysis. The protein concentration was calculated on the basis of KorB as a dimer but IncC as a monomer, since we have no information at present on the oligomeric state of IncC.