TABLE 2.
Lengths of symbiotic contigs extracted from Neohaematopinus lice meta-assemblies.
Neohaematopinus pacificus sample name | SSR data code | Lightella neohaematopini draft genome code | Number of Lightella neohaematopini contigs | Total length of Lightella neohaematopini contigs (bp) | Length of the longest Lightella neohaematopini contig | Neisseriaceae* symbiont draft genome Code | Number of Neisseriaceae* symbiont Contigs | Total length of Neisseriaceae* symbiont contigs (bp) | Length of the longest Neisseriaceae* Symbiont contig |
DZTM1119Np | SRR12483222 | L222 | 14 | 463,996 | 105,366 | N222 | 3 | 6,579 | 3,880 |
DZTM377Np | SRR5088469 | L469 | 7 | 463,572 | 217,438 | N469 | 14 | 8,463 | 2,334 |
DZTM1701Np | SRR12483220 | L220 | 7 | 463,522 | 188,166 | N220 | 7 | 1,722 | 283 |
MVZ225305Np | SRR12483207 | L207 | 5 | 462,938 | 217,084 | N207 | 1 | 276 | 276 |
NK217036N | SRR12483201 | L201 | 6 | 462,716 | 216,235 | N201 | 24 | 13,211 | 5,588 |
DZTM1620Np | SRR12483221 | L221 | 6 | 462,700 | 216,229 | N221 | 7 | 1,765 | 290 |
DZTM2189Np | SRR12483218 | L218 | 45 | 462,561 | 37,759 | – | – | – | – |
ZM.13956Np | SRR12483208 | L208 | 6 | 461,635 | 216,026 | N208 | 5 | 1,247 | 297 |
DZTM230Np | SRR12483217 | L217 | 102 | 451,834 | 27,981 | N217 | 5 | 1,314 | 282 |
ZM.13998Np | SRR12483209 | L209 | 142 | 419,545 | 10,090 | N209 | 6 | 1,484 | 278 |
DZTM2717Np | SRR12483214 | L214 | 205 | 395,449 | 7,732 | N214 | 6 | 2,034 | 689 |
MSB84515Np | SRR12483204 | L204 | 105 | 347,616 | 11,111 | N204 | 653 | 620,299 | 11,296 |
DZTM268Np | SRR12483215 | L215 | 223 | 102,538 | 2,639 | N215 | 30 | 7,499 | 295 |
DZTM708Np | SRR12483211 | L211 | 231 | 92,062 | 1,150 | N211 | 1 | 249 | 249 |
NK181766Np | SRR12483203 | L203 | 144 | 51,326 | 1,557 | – | – | – | – |
DZTM203Np | SRR12483219 | L219 | 134 | 39,424 | 660 | N219 | 7 | 1,835 | 291 |
DZTM946Np | SRR12483210 | L210 | 75 | 21,336 | 734 | – | – | – | – |
DZTM2776Np | SRR12483213 | L213 | 3 | 12,058 | 1,097 | N213 | 31 | 8,034 | 346 |
MVZ225310Np | SRR12483206 | L206 | 46 | 11,224 | 3,732 | N206 | 459 | 1,476,030 | 17,945 |
DZTM584Np | SRR12483212 | L212 | 7 | 1,740 | 284 | N212 | 4 | 1,058 | 307 |
NK215220Np | SRR12483202 | – | – | – | – | – | – | – | – |
The most complete and least fragmented genome drafts of L. neohaematopini are highlighted in green. The L. neohaematopini samples are ordered according to the total length of the concatenated genome drafts. *Neisseriaceae-related.