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. 2022 Jul-Sep;14(3):216–222. doi: 10.18502/ajmb.v14i3.9828

Table 3.

Comparison of Se400 sequence specificity with other introduced genes for detecting S. epidermidis in species level

Target Length Similarity to non-S. epidermidis genomes with >35% query cover and >60% identity
Se400 400 bp No similarity to any non-S. epidermidis microbes
gseA (2004) 1214 bp
  • 3 strains of S. saccharolyticus with >68% query cover and >75% identity

  • 5 strains of S. caprae with >58% query cover and >69% identity

  • 11 strains of S. warneri with 55% query cover and 67% identity

  • >1300 strain of S. aureus with 50% query cover and 67–69% identity

  • 6 strains of S. pasteur with 46–51% query cover and 67–69% identity

serp0107 (2006) 882 bp
  • 3 strains of S. saccharolyticus with 98% query cover and 69% identity

  • 7 strains of S. capitis with 95% query cover and 68% identity

  • 5 strains of S. caprae with 66% query cover and 70% identity

  • 3 strains of S. haemolyticus with 42% query cover and >68% identity

  • Other microorganisms: S. warneri S. hominis, S. argenteus

sesC (2016) 2031 bp
  • 3 strains of S. saccharolyticus with 83–100% query cover and >69% identity

  • 7 strains of S. capitis with 42% query cover and >67% identity

  • 5 strains of S. caprae with 52% query cover and 66% identity

ecpB (2019) 318 bp
  • 3 strains of S. saccharolyticus with 100% query cover and >77% identity

  • 19 strain of S. aureus with 65% query cover and 67% identity

The specificity of the genes was tested bioinformatically using Blastn software.