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. 2022 Aug 1;18(13):5103–5122. doi: 10.7150/ijbs.75410

Table 2.

Phase separation related databases

Name URL Functions
IUPred https://iupred2a.elte.hu/plot Prediction of disordered protein regions
PLAAC http://plaac.wi.mit.edu/ Prediction of prion-like region
PONDR http://www.pondr.com Predictor of natural disordered regions
MobiDB https://mobidb.org Provides information about intrinsically disordered regions and related features
CIDER http://pappulab.wustl.edu/CIDER/ Calculation of many different parameters associated with disordered protein sequences
ZipperDB https://services.mbi.ucla.edu/zipperdb/ Predictions of fibril-forming segments within protein
D2P2 http://d2p2.pro/ Database of disordered protein predictions
Metadisorder http://iimcb.genesilico.pl/metadisorder/ Prediction of protein disorder
Expasy https://web.expasy.org/compute_pi/ Computation of the theoretical pI (isoelectric point) and Mw (molecular weight)
AMYCO http://bioinf.uab.es/amycov04/ Evaluation of mutation impact on prion-like proteins aggregation propensity
RPS http://rps.renlab.org/#/Home A comprehensive database of RNAs involved in liquid-liquid phase separation
RNAPhaSep http://www.rnaphasep.cn/#/Home A resource of RNAs undergoing phase separation
LLPSDB http://biocomp.ucas.ac.cn/llpsdb/home.aspx A database of proteins undergoing liquid-liquid phase separation in vitro