Table 2.
Phase separation related databases
| Name | URL | Functions |
|---|---|---|
| IUPred | https://iupred2a.elte.hu/plot | Prediction of disordered protein regions |
| PLAAC | http://plaac.wi.mit.edu/ | Prediction of prion-like region |
| PONDR | http://www.pondr.com | Predictor of natural disordered regions |
| MobiDB | https://mobidb.org | Provides information about intrinsically disordered regions and related features |
| CIDER | http://pappulab.wustl.edu/CIDER/ | Calculation of many different parameters associated with disordered protein sequences |
| ZipperDB | https://services.mbi.ucla.edu/zipperdb/ | Predictions of fibril-forming segments within protein |
| D2P2 | http://d2p2.pro/ | Database of disordered protein predictions |
| Metadisorder | http://iimcb.genesilico.pl/metadisorder/ | Prediction of protein disorder |
| Expasy | https://web.expasy.org/compute_pi/ | Computation of the theoretical pI (isoelectric point) and Mw (molecular weight) |
| AMYCO | http://bioinf.uab.es/amycov04/ | Evaluation of mutation impact on prion-like proteins aggregation propensity |
| RPS | http://rps.renlab.org/#/Home | A comprehensive database of RNAs involved in liquid-liquid phase separation |
| RNAPhaSep | http://www.rnaphasep.cn/#/Home | A resource of RNAs undergoing phase separation |
| LLPSDB | http://biocomp.ucas.ac.cn/llpsdb/home.aspx | A database of proteins undergoing liquid-liquid phase separation in vitro |