TABLE 2.
Genes and gene products of the dxn locus
| Gene | Position in sequence (nt)c | Probable function or product | Calculated molecular mass (Da) | Protein with homologous sequence | Source | % Identitya | Reference for homologous proteinb |
|---|---|---|---|---|---|---|---|
| dxnC | 12028–13923 | Unknown | 66,917 | FyuA-YEREN | Yersinia enterolitica | 5 | P46360 |
| FyuA-YERPE | Yersinia pestis | 5 | P46359 | ||||
| ViuA-VIBCH | Vibrio cholerae | 5 | Q00964 | ||||
| ORF2d | 13992–14444 | Unknown | 15,866 | ||||
| fdx3 | 14621–14941 | Electron carrier | 11,379 | Fdx1-RW1 | Sphingomonas sp. strain RW1 | 45 | Y13118 |
| PutX-PSESP | Pseudomonas putida | 44 | P00259 | ||||
| FdVI-RHOCA | Rhodobacter capsulatus | 36 | P80306 | ||||
| dxnD | 14991–16883 | 4-Hydroxysalicylate hydroxylase | 68,999 | HbpA-HPB1 | Pseudomonas azelaica | 28 | U73900 |
| PheA-PSESP | Pseudomonas sp. strain EST1001 | 13 | P31020 | ||||
| HydL-STRHA | Streptomyces halstechii | 12 | Q05355 | ||||
| TfdB-ALCEU | Ralstonia eutropha | 11 | P27138 | ||||
| dxnE | 16883–17953 | Maleylacetate reductase | 36,723 | TcbF-PSESP | Pseudomonas sp. strain P51 | 55 | P27101 |
| TfdF-ALCEU | Ralstonia eutropha | 51 | P27137 | ||||
| dxnF | 17978–18877 | Hydroxyquinol 1,2-dioxygenase | 33,080 | HadC-DTP0602 | Ralstonia pickettii | 44 | D86544 |
| TftH-AC1100 | Burkholderia cepacia | 44 | U19883 | ||||
| ClcA-PSEPU | Pseudomonas putida | 24 | P11451 | ||||
| CatA-ACICA | Acinetobacter calcoaceticus | 24 | P07773 | ||||
| TfdC-pJP4 | Ralstonia eutropha | 23 | P05413 | ||||
| dxnG | 18874–19584 | 3-Oxoadipate succinyl-CoA transferase (α-subunit) | 25,914 | YxjD-BACSU | Bacillus subtilis | 58 | D83026 |
| PcaJ-PSEPU | Pseudomonas putida | 43 | Q01103 | ||||
| AtoD-HAEIN | Haemophilus influenzae | 35 | P44875 | ||||
| dxnH | 19584–20246 | 3-Oxoadipate succinyl-CoA transferase (β-subunit) | 22,986 | YxjE-BACSU | Bacillus subtilis | 60 | D83026 |
| PcaJ-PSEPU | Pseudomonas putida | 57 | Q01104 | ||||
| CtfB-CLOAB | Clostridium acetobutylicum | 51 | P14611 | ||||
| dxnI | 20265–21449 | Acetyl-CoA acetyltrans-ferase (thiolase) | 41,723 | PcaF-PRS2000 | Pseudomonas putida | 52 | U10895 |
| PcaF-ADP1 | Acinetobacter sp. strain ADP1 | 51 | L05770 | ||||
| ThiL-HAEIN | Haemophilus influenzae | 34 | Q57190 | ||||
| ThiL-ALCEU | Ralstonia eutropha | 32 | P14611 | ||||
| ORF10 | 21689–22264 | Transposase | >21,133 | Tra3-RHIME | Rhizobium meliloti | 61 | P80011 |
| Tra-CORDI | Corynebacterium diphtheriae | 31 | P35879 | ||||
| Tra5-LACLA | Lactococcus lactis | 24 | P35881 |
a
Percentage of amino acids that are identical when sequences are aligned with sequences listed in the GenBank database by using the algorithm of Needleman and Wunsch via the Blitz program of the European BioInformatic Institute facilities.
b
Accession number in the SwissProt and EMBL/DDBJ/GenBank formats.
c
Accession no. X72850. nt, nucleotide.
d
This gene’s product showed no similarity to known proteins.