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. 2022 Aug 16;13:4827. doi: 10.1038/s41467-022-32552-1

Table 1.

Comparison of SenMayo with six existing senescence/SASP gene sets

Human aging Mouse aging Mouse genetic clearance of senescent cells Human pharmacological clearance of senescent cells
Cohort A Cohort B Microglia Prefrontal cortex Dorsal hippocampus Bone marrow Mouse INK-ATTAC (old vs young) Mouse INK-ATTAC (old, vehicle vs AP) Adipose (Control vs D + Q)
NES p value NES p value NES p value NES p value NES p value NES p value NES p value NES p value NES p value
R-HSA-2559582 1.1075 0.2826 0.6780 0.9278 1.1794 0.1565 −1.2467 0.1169 1.2117 0.1916 0.9200 0.6043 1.4235 0.0326 1.0006 0.4442 1.1176 0.2356
Casella_up 1.0089 0.4748 0.6970 0.8885 0.9737 0.4790 0.9537 0.5209 1.3949 0.0593 0.8874 0.6339 −1.0861 0.3168 0.6865 0.9627 −0.7959 0.8344
Purcell 0.9329 0.5944 0.9585 0.5093 1.5120 0.0178 1.1731 0.2304 1.8117 0.0000 1.5224 0.0419 1.3894 0.0778 −0.7300 0.8874 0.9132 0.5852
Hernandez 0.7849 0.7771 0.7846 0.7802 0.7146 0.9461 0.8662 0.6710 −0.8100 0.7650 −0.5778 0.9789 1.2513 0.1718 1.4796 0.0266 0.9476 0.5266
Fridman_up 1.4249 0.0169 1.5407 0.0174 1.4397 0.0206 0.9639 0.5449 1.7482 0.0000 1.6100 0.0163 1.0762 0.3145 1.3413 0.0347 1.4187 0.0122
Sencan −0.8460 0.9362 0.8038 0.8235 0.8674 0.8144 1.0328 0.4006 1.5302 0.0011 0.7247 0.8667 0.8838 0.7312 −1.0674 0.3182 0.8643 0.8983
SenMayo 1.5122 0.0023 1.4982 0.0031 1.4624 0.0052 1.6098 0.0013 1.8501 0.0000 1.5100 0.0362 1.5042 0.0023 1.4586 0.0054 1.4856 0.0020

Note that in GSEA analyses, p values < 0.25 are considered potentially significant, although we also identified p values <0.05 and <0.01 (NES, normalized Enrichment Score). Nominal p value, calculated as two-sided t-test, no adjustment since only one gene set was tested.