| Antibodies |
|
| Anti-Guinea Pig IgG (H+L), highly cross-adsorbed, CF™ 488A antibody produced in donkey (1: 1000) |
Sigma-Aldrich |
Cat#SAB4600033 |
| Anti-MAP2 polyclonal antibody (guinea pig) (1: 1000) |
Synaptic Systems |
Cat#188004 |
| Anti-Neurofilament mixture of monoclonal antibodies, SMI312 (mouse) (1:500) |
BioLegend |
Cat#837904 |
| Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 568 (1: 1000) |
Invitrogen |
Cat#A-11031 |
|
| Chemicals, peptides, and recombinant proteins |
|
| 16% Paraformaldehyde (PFA) |
Thermo Fisher Scientific |
Cat#28906 |
| B27 |
Gibco |
Cat#17504044 |
| BDNF |
MACS Miltenyi |
Cat#130-096-811 |
| Bovine Serum Albumin |
Sigma-Aldrich |
Cat#A9647 |
| Cytosin-1-β-D-arabinofuranosid (AraC) |
Sigma-Aldrich |
Cat#C1768 |
| DMEM/F-12 |
Gibco |
Cat#31330095 |
| Doxycycline hydrochloride (DOX) |
Sigma-Aldrich |
Cat#D3072 |
| Geltrex |
Gibco |
Cat#A1413201 |
| GlutaMAX |
Gibco |
Cat#35050061 |
| Hoechst 33342 |
Invitrogen |
Cat#H3570 |
| Laminin |
Sigma-Aldrich |
Cat#L2020 |
| MycoZap |
Lonza |
Cat#VZA-2012 |
| Neurobasal |
Gibco |
Cat#21103-049 |
| NT-3 |
Biozol/PeproTech |
Cat#450-03 |
| PBS w/o calcium and magnesium |
Gibco |
Cat#14190144 |
| ROCK inhibitor Y-27632 |
Enzy Life Sciences |
Cat#ALX-270-333-M005 |
| Sodium Azide |
Sigma-Aldrich |
Cat#71289 |
| StemPro Accutase |
Thermo Fisher Scientific |
Cat#A1110501 |
| Triton X-100 |
Bio-Rad |
Cat#161-0407 |
|
| Deposited data |
|
| CellProfiler pipeline neurite outgrowth |
This paper |
https://doi.org/10.5281/zenodo.6642365 |
|
| Experimental models: Cell lines |
|
| Human: BIHi005-A-24 cell line |
Berlin Institute of Health |
N/A |
|
| Software and algorithms |
|
| CellProfiler 4.2.1. |
Carpenter et al. (2006) |
https://cellprofiler.org/ |
|
| Other |
|
| 384 well Cell Culture Microplate, PS, F-Bottom, black TC, μCLEAR |
Greiner Bio-One |
Cat#781091 |
| CytoSmart Cell Counter |
Greiner Bio-One |
Cat#6749 |
| Operetta® CLS™ |
PerkinElmer |
Cat#HH16000000 |