Table 3. Liver proteins differentially expressed in the HFX vs. HFD.

Accession Number	Symbols	Protein name	Mass	Total Mascot score	Matched peptide	Sequences	Calculated PI	Sequence Coverage	emPAI	Fold change (HFX/HFD)	Spot number
AAH10445.1	Fkbp4	Hsp90b1 Heat shock protein 90, beta (Grp94), member 1	92717	2808	87(87)	55(55)	4.74	42	21.44	5.7	12
AAH24055.1	Aldh1l1	Aldh1l1 protein	99527	1323	42(42)	26(26)	5.69	25	3.16	3.7	15
AAH48380.1	Ces3b	Carboxylesterase 3B	63790	52	1(1)	1(1)	5.79	1	0.11	4.2	90
NP_062287.1	Selenbp2	selenium-binding protein 2	53165	752	43(43)	12(12)	5.78	23	2.46	3.8	138
NP_062287.1	Selenbp2	selenium-binding protein 2	53165	1432	97(97)	23(23)	5.78	37	9.04	3.2	139
NP_062287.1	Selenbp2	selenium-binding protein 2	53165	1594	127(127)	23(23)	5.78	47	8.55	3.8	144
NP_062287.1	Selenbp2	selenium-binding protein 2	53165	455	18(18)	8(8)	5.78	17	1.03	4.6	145
NP_062287.1	Selenbp2	selenium-binding protein 2	53165	212	5(5)	4(4)	5.78	7	0.43	3.3	183
NP_032282.2	Hmgcs2	hydroxymethylglutaryl-CoA synthase	57300	1115	120(120)	19(19)	8.65	27	4.64	-2.5	207
NP_032282.2	Hmgcs2	hydroxymethylglutaryl-CoA synthase	57300	201	7(7)	4(4)	8.65	7	0.39	2.5	370
EDL01201.1	mCG129115	mCG129115	52628	144	3(3)	3(3)	4.95	5	0.31	-2.9	197
CAA27558.1	Gpx6	glutathione peroxidase	22504	335	10(10)	6(6)	6.74	32	3.28	2.7	225
NP_062800.1	Ivd	isovaleryl-CoA dehydrogenase	46695	933	65(65)	17(17)	8.53	29	7.36	2.5	691
NP_062268.1	Fbp1	fructose-1,6-bisphosphatase 1	37288	1185	97(97)	18(18)	6.15	38	11.47	5.2	285
BAA19003.1	Phyh	LN1	39053	542	23(23)	12(12)	7.64	26	6.97	4.6	322
EDL01227.1	mCG8752	mCG8752, isoform CRA_c	50255	802	59(59)	13(13)	6.02	26	2.72	2.6	357
EDL26822.1	Psme4	proteasome	31081	139	2(2)	2(2)	8.80	6	0.37	2.5	375
NP_038569.1	Gstp1	glutathione S-transferase P 1	23765	345	19(19)	5(5)	7.68	28	4.90	4.4	428
NP_080175.1	Uqcrc2	cytochrome b-c1 complex subunit 2	48262	971	34(34)	16(16)	9.26	30	5.09	3.4	714
EDL31590.1	mt-Atp8	ATP synthase	17589	158	6(6)	2(2)	5.01	16	0.70	2.3	717