Table 3.

Differentially expressed genes (DEGs) within sub-clusters

Sub-cluster	Total genes expressed	Total DEGs	Upregulated DEGs in aged	Downregulated DEGs in aged
Corpus luteum-regressing
0	11,617	2	1	1
1	10,819	76	45	31
2	11,098	2,531	18	2,513
3	11,834	52	4	48
4	11,172	0	0	0
5	8,458	0	0	0
6	11,432	11	0	11
7	10,497	0	0	0
8a	–	–	–	–
Corpus luteum-progressing
0	11,965	0	0	0
1	11,253	134	4	130
2	12,180	17	13	4
3	11,834	52	4	48
Stroma
0	9,750	6	0	6
1	11,561	0	0	0
2	11,013	1,052	57	995
3	10,228	1	0	1
4	10,786	41	0	41
5	11,211	71	1	70
6	11,048	26	2	24
7	10,497	0	0	0
Follicle
0	11,946	177	0	177
1	11,063	602	0	602
2	11,826	2	0	2
3	11,962	4	0	4
4	11,665	1	1	0
5	11,610	16	5	11
6	11,432	11	0	11

^aToo few spots to analyze.