Table 4.

Comparison of Ampli1 LowPass and TruSeq PCR‐free library preparation methods by MAD measured on chromosome 2 of MCF‐7 cells. Samples with lower MADs have green fills. *Wilcoxon signed rank P = 0.79. No., number; MAD, mean absolute deviation.

Sample No.	Name	MAD TruSeq PCR‐free*	MAD Ampli1 LowPass*
11	MCF‐7, 1A	0.292	0.283
12	MCF‐7, 1B	0.292	0.266
13	MCF‐7, 1C	0.240	0.245
14	MCF‐7, 2A	0.260	0.266
15	MCF‐7, 2B	0.260	0.268
16	MCF‐7, 5	0.266	0.275
17	MCF‐7, 10	0.241	0.230
19	MCF‐7, QC‐6	0.237	0.248
20	MCF‐7, QC‐5	0.309	0.204
21	VyCAP Ctrl 1	0.260	0.320
22	VyCAP Ctrl 2	0.448	0.431
23	MCF‐7, Ampli1	0.182	0.186