NPS
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Already established as the specimen of choice for the diagnosis of many viral respiratory infections [4, 5]
Likely to be less variation in the sensitivity of the specimen if food/drink etc. is consumed before sample is taken
Antigen tests are established for using NPS as their input
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Uncomfortable and invasive specimen to collect
Not suitable for children
Requires trained HCWs in order for the sample to be collected
Puts HCWs at risk of nosocomial infection
Incorrect swabbing due to poor technique from administrator or resistance from the patient can impact sensitivity
Not suitable for mass-testing/surveillance due to logistics and repeated sampling can cause adverse effects to the patient [13]
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Saliva
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Less invasive specimen to collect and therefore patients are more likely to get tested and give repeated samples
Can be self-administered from home, so no trained HCWs or test sites are required
Suitable for COVID-19 mass testing/ surveillance
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No established collection, transport and processing protocol
Time of day of sampling as well as food/drink/oral hygiene/smoking can impact the specimen’s sensitivity
Antigen tests are not established for using saliva as their input
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