| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Antibodies | ||
| P2C-1F11 | Ge et al. (2021) | PDB code 7CDI |
| 4A8 | Chi et al. (2020) | PDB code 7C2L |
| CC40.8 | Zhou et al. (2022) | PDB code 7SJS |
| REGN10933 | Hansen et al. (2020) | PDB code 6XDG |
| REGN10987 | Hansen et al. (2020) | PDB code 6XDG |
| VRC01 | Zhou et al. (2013) | PDB code 4LST; RRID: AB_2491019 |
| HRP goat anti-human IgG (H + L), polyclonal | ZSGB-BIO | Cat# ZB-2304 |
| Bacterial and virus strains | ||
| E. coli DH5α | Takara | Cat# 9057 |
| SARS-CoV-2/wild-type (WT) | Ju et al. (2022) | N/A |
| SARS-CoV-2/Beta | Ju et al. (2022) | N/A |
| SARS-CoV-2/Delta | Ju et al. (2022) | N/A |
| Chemicals, peptides, and recombinant proteins | ||
| FreeStyle 293 expression medium | Gibco | Cat# 12338026 |
| SARS-CoV-2 WT S1 | Sino Biological Inc. | Cat# 40591-V08H |
| SARS-CoV-2 WT RBD | Sino Biological Inc. | Cat# 40592-V08B |
| SARS-CoV-2 WT NTD | Sino Biological Inc. | Cat# 40591-V49H |
| SARS-CoV-2 WT S2 | Sino Biological Inc. | Cat# 40590-V08B |
| SARS-CoV-2 WT spike | Sino Biological Inc. | Cat# 40589-V08B1 |
| SARS-CoV-2 WT NP | Sino Biological Inc. | Cat# 40588-V08B |
| SARS-CoV spike | Sino Biological Inc. | Cat# 40634-V08B |
| MERS-CoV spike | Sino Biological Inc. | Cat# 40069-V08B |
| HCoV-HKU1 spike | Sino Biological Inc. | Cat# 40606-V08B |
| HCoV-OC43 spike | Sino Biological Inc. | Cat# 40607-V08B |
| HCoV-229E spike | Sino Biological Inc. | Cat# 40605-V08B |
| HCoV-NL63 spike | Sino Biological Inc. | Cat# 40604-V08B |
| Penicillin-Streptomycin (10,000 U/mL) | Gibco | Cat# 15140163 |
| Ampicillin | Amresco | Cat# 69-52-3 |
| Polyethylenimines (PEIs) 25K | PolySciences | Cat# 23966 |
| Trypsin | Gibco | Cat# 25200–072 |
| Fetal bovine serum | Gibco | Cat# 10099–141C |
| Dulbecco’s Modified Eagle Medium | Gibco | Cat# 11965–092 |
| HEPES (1M) Buffer Solution | Gibco | Cat# 15630–080 |
| Opti-MEM Reduced Serum Medium | Gibco | Cat# 51985034 |
| Roswell Park Memorial Institute (RPMI) 1640 Medium | Gibco | Cat# 11875–101 |
| DEAE-Dextran hydrochloride | Sigma Aldrich | Cat# D9885-10G |
| Critical commercial assays | ||
| RNeasy Plus Mini Kit | Qiagen | Cat# 74134 |
| QIAquick Gel Extraction Kit | Qiagen | Cat# 28706 |
| Bright-Lite Luciferase Assay System | Vazyme Biotech | Cat# DD1204-03 |
| Single Cell Full Length mRNA-Amplification Kit | Vazyme Biotech | Cat# N712 |
| Gold Hi EndoFree Plasmid Maxi Kit | CWBIO | Cat# CW2104M |
| TMB substrate | Sangon Biotech | Cat# E661007-0100 |
| Deposited data | ||
| Human antibody repertoire | This paper | National Genomics Data Center: HRA002366 |
| Experimental models: Cell lines | ||
| HEK293F | Gibco | Cat# R79007 |
| Human: HEK293T | ATCC | Cat# CRL-3216 |
| HEK293T expressing human ACE2 | YEASEN Biotech | Cat# 41107ES03 |
| Jurkat-FcγRIIIa-V158 Effector Cells | Vazyme Biotech | Cat# DD1301 |
| Recombinant DNA | ||
| pNL4-3.Luc.R-E− | NIH AIDS Reagent Program | Cat# 3418 |
| Software and algorithms | ||
| TrimGalore v0.6.0 | Trim Galore | https://github.com/FelixKrueger/TrimGalore/ |
| PANDAseq v2.11 | Masella et al. (2012) | https://github.com/neufeld/pandaseq |
| IgBlast v1.17.1 | Ye et al. (2013) | https://ncbi.github.io/igblast/ |
| Needleall | A program from EMBOSS package | http://emboss.sourceforge.net/apps/release/6.6/emboss/apps/needleall.html |
| MEGA v10.2.6 | Kumar et al. (2008) | https://www.megasoftware.net/ |
| PyMOL | PyMOL | http://www.pymol.org |
| Graphpad Prism 8 | GraphPad | https://www.graphpad.com/ |
| R | R | https://www.r-project.org/ |
| Other | ||
| IMGT Reference directory sets | Lefranc et al. (2005) |
http://www.imgt.org/vquest/refseqh. html#VQUEST |