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. 2022 Aug 9;13:912147. doi: 10.3389/fmicb.2022.912147

Table 1.

Oligonucleotide primers specific to VP7, VP4, and VP6 RVA genes.

Name Outer/inner Fwd./rev. Sequence (5′ − 3′) Locationa Product size
Human VP7
H7F292_N Outer fwd. TGYYTRTAYTAYCCWDBHKMRG 292–313 347
H7F340_N Outer fwd. TGGAMRRAYWCDYTDTCNCAR 340–360 299
H7R638_N Outer rev. GGACAHACTTTHAYNGTRCA 619–638 −
H7F373 Inner fwd. AARGGDTGGCCRACWRRATC 373–392 239
H7R611 Inner rev. CCCATHGMWATCCAYTTRTTYGM 589–611
Human VP4
H4F793_N Outer fwd. TGGAARGARATGCARTATAAY 793–813
H4R1149_N Outer rev. RCABWYYACDKMRTTYAAATY 1,129–1,149 357
H4R1208_N Outer rev. CCHCCDBTCATHAYTGGSY 1,190–1,208 416
H4F865 Inner fwd. GGWYTRGGHTATAARTGGKCHGAA 865–888 229
H4R1093 Inner rev. ATGCYTKHGAATCRTCCCAR 1,074–1,093
Human VP6
H6F648_N Outer fwd. GARCAYRTWGTMCAGCTHMG 648–667 462
H6R1109_N Outer rev. YGGRAADACTGGTCCAACTGGTAT 1,086–1,109
H6F745 Inner fwd. CWGAYGGMGCRACTACATGG 745–764 250
H6R994 Inner rev. ARYGTVAGTCCWACTGTWGC 975–994
Animal VP6
A6F192_N Outer fwd. AGAAAYTGGAMWTTYRAYTTYGG 192–214 457
A6R648_N Outer rev. CAAAYTGYTGHRTATTWGCTGG 627–648
A6F303 Inner fwd. AATGTRTGYATGGATGARATRGYWMGR 303–329 272
A6R574 Inner rev. GCRTTHADCCACATNGTNCC 555–574
a

Locations of the NCBI reference nucleotide sequence (accession no. NC011503.2 for human VP7, NC011510.2 for human VP4, and NC011509.2 for both human and animal VP6) are represented.