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. 2022 Aug 17;7(34):29995–30014. doi: 10.1021/acsomega.2c03007

Table 2. The Per-Residue Energy Decomposition Results of Key Interacting Residues of SARS-CoV-2, SARS-CoV, MERS-CoV, and SARS-CoV-2 Mutant NSP14–NSP10 Complexesa.

  PPI complex systems per-residue energy contribution (kJ/mol)
NSP14-K200 NSP14-I201 NSP10-F19 NSP10-V21
replica 1 wild-type SARS-CoV-2 –21.50 ± 0.91 –6.71 ± 0.27 –25.03 ± 0.89 –13.16 ± 0.48
SARS-CoV-2/NSP14P203L –26.81 ± 0.56 –8.17 ± 0.18 –31.01 ± 0.20 –16.48 ± 0.15
SARS-CoV-2/NSP14F233L –17.98 ± 1.14 –7.26 ± 0.18 –30.34 ± 0.21 –15.82 ± 0.15
SARS-CoV-2/NSP14L177F –23.50 ± 0.70 –7.71 ± 0.19 –29.16 ± 0.23 –15.40 ± 0.19
SARS-CoV-2/NSP14triple –28.49 ± 0.59 –7.76 ± 0.19 –31.15 ± 0.19 –15.54 ± 0.15
SARS-CoV –44.59 ± 0.67 –5.61 ± 0.21 –27.66 ± 0.20 –17.08 ± 0.17
MERS-CoV –6.64 ± 0.68 –3.82 ± 0.33 –14.02 ± 0.95 –9.46 ± 0.66
replica 2 wild-type SARS-CoV-2 –22.95 ± 0.51 –9.05 ± 0.17 –29.76 ± 0.20 –16.09 ± 0.16
SARS-CoV-2/NSP14P203L –26.61 ± 0.49 –5.29 ± 0.16 –30.63 ± 0.20 –15.22 ± 0.17
SARS-CoV-2/NSP14F233L –23.03 ± 0.44 –5.38 ± 0.17 –32.51 ± 0.17 –16.24 ± 0.16
SARS-CoV-2/NSP14L177F –13.61 ± 0.55 –8.03 ± 0.19 –30.50 ± 0.22 –15.27 ± 0.15
SARS-CoV-2/NSP14triple –29.50 ± 0.67 –5.49 ± 0.21 –31.08 ± 0.19 –15.56 ± 0.14
SARS-CoV –40.68 ± 0.83 –5.53 ± 0.16 –29.92 ± 0.23 –16.69 ± 0.16
MERS-CoV –24.20 ± 0.62 –2.51 ± 0.21 –25.83 ± 0.21 –16.64 ± 0.16
replica 3 wild-type SARS-CoV-2 –22.28 ± 0.67 –5.10 ± 0.16 –30.63 ± 0.17 –13.41 ± 0.17
SARS-CoV-2/NSP14P203L –10.85 ± 0.61 –9.09 ± 0.16 –29.09 ± 0.20 –14.52 ± 0.13
SARS-CoV-2/NSP14F233L –26.70 ± 0.73 –7.68 ± 0.17 –28.75 ± 0.19 –15.34 ± 0.16
SARS-CoV-2/NSP14L177F –21.46 ± 46 –8.65 ± 0.16 –30.81 ± 0.22 –15.11 ± 0.18
SARS-CoV-2/NSP14triple –21.39 ± 0.71 –7.85 ± 0.16 –30.48 ± 0.21 –15.62 ± 0.13
SARS-CoV –22.30 ± 0.80 –8.85 ± 0.16 –30.35 ± 0.24 –16.41 ± 0.15
MERS-CoV –25.53 ± 0.76 –5.23 ± 0.76 –31. 90 ± 0.21 –17.74 ± 0.16
a

The per-residue energy decomposition analysis was carried out using the last 20 ns MD trajectory of the three sets of MD simulation.