Table 2.
Significantly up- or downregulated DEGs in NS versus HTP and CS versus HTP at 5% FDR as estimated by DESeq2.
| trackingID | genename | baseMean | P adj | ||
|---|---|---|---|---|---|
| NS vs. HTP | Upregulated | ENSG00000154165 | GPR15 | 73.47 | 6.75.E-32 |
| ENSG00000166833 | NAV2 | 138.08 | 7.28.E-03 | ||
| Downregulated | ENSG00000149557 | FEZ1 | 204.15 | 3.18.E-03 | |
| ENSG00000162747 | FCGR3B | 4,390.78 | 3.18.E-03 | ||
| ENSG00000147206 | NXF3 | 17.80 | 3.55.E-03 | ||
| ENSG00000158113 | LRRC43 | 60.98 | 7.60.E-03 | ||
| ENSG00000124102 | PI3 | 20.82 | 0.0154 | ||
| ENSG00000136848 | DAB2IP | 73.39 | 0.0154 | ||
| ENSG00000163464 | CXCR1 | 234.61 | 0.0192 | ||
| ENSG00000204466 | DGKK | 114.17 | 0.0288 | ||
| ENSG00000140932 | CMTM2 | 64.89 | 0.0350 | ||
| ENSG00000174348 | PODN | 158.35 | 0.0358 | ||
| ENSG00000106018 | VIPR2 | 24.61 | 0.0437 | ||
| ENSG00000106714 | CNTNAP3 | 139.60 | 0.0437 | ||
| ENSG00000154529 | CNTNAP3B | 31.67 | 0.0437 | ||
| CS vs. HTP | Upregulated | ENSG00000171954 | CYP4F22 | 62.32 | 4.50.E-03 |
| ENSG00000148498 | PARD3 | 387.40 | 9.13.E-03 | ||
| Downregulated | ENSG00000063438 | AHRR | 82.13 | 7.05.E-07 | |
| ENSG00000253230 | LINC00599 | 5.61 | 7.83.E-07 | ||
| ENSG00000248318 | RP11–713M15.1 | 5.78 | 0.0134 |
Abbreviations: baseMean, the average of the normalized count values; Padj, FDR-adjusted P value; trackingID, indicates Ensembl Gene ID.