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. 2022 Aug 5;25(9):104818. doi: 10.1016/j.isci.2022.104818
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Anti-mouse CD3 BioXCell Clone:145–2C11; Cat#BE0001–1; RRID:AB_1107634
Anti-mouse CD28 BioXCell Clone:37.51; Cat#BE0015–1; RRID:AB_1107624
Anti-mouse FoxP3-PE eBioscience Clone:FJK-16s; Cat#12-5773-82
Anti-mouse CD4-PE/Cy7 Biolegend Clone:GK5.1; Cat#100422; RRID:AB_312707
Anti-mouse CD4-APC Biolegend Clone:GK5.1; Cat#100412; RRID:AB_312697
Anti-mouse CD44-APC Biolegend Clone; IM7; Cat#103012; RRID:AB_312963
Anti-mouse IFN-γ-PE Biolegend Clone: XMG1.2; Cat#505808; RRID:AB_315402
Anti-mouse TNF-α-PE/Cy7 Biolegend Clone: MP6-XT22; Cat#506306; RRID:AB_315427
Anti-mouse CD69-PE Biolegend Clone: H1.F3; Cat#104508; RRID:AB_313111
Anti-mouse TGF-β Biolegend Cat#580702
Anti-mouse CD8-BV510 Biolegend Clone: 53–6.7; Cat#100752; RRID:AB_2563057
Biotinylated anti-mouse CD19 Biolegend Cat#101504; RRID:AB_312823
Biotinylated anti-mouse CD11b Biolegend Cat#101204; RRID:AB_312787
Biotinylated anti-mouse CD11c Biolegend Cat# 117304; RRID:AB_313773
Biotinylated anti-mouse NK1.1 Biolegend Cat# 108704; RRID:AB_313391
Biotinylated anti-mouse CD25 Biolegend Cat# 102004; RRID:AB_312853

Chemicals, peptides, and recombinant proteins

Streptavidin magnetic beads BD Biosciences Cat#557812
IL-2 Frederick National Laboratory for Cancer research Tecin(teceleukin); Ro 23-6019
Retinoic acid Sigma Cat# R2625-50MG
RANKL R&D Systems Cat# 462-TEC-010
M-CSF Cat# 576,404
Collagenase-P Roche Diagnostic Corporation Cat#11249002001
IMDM media Hyclone Cat#SH30228.01
Alpha-MEM Gibco Cat#12571-048
Fetal Calf Serum AtlantaBiologicals Cat#S11150
Fetal Bovine Serum Gibco Cat#26140-079
L-glutamine Sigma Catalog #G8540-100G
Penicillin/Streptomycin AtlantaBiologicals Catalog #B21210
Beta-mercaptoethanol Thermo Scientific Catalog # 35602
Ascorbic acid 2-phosphate Wako Pure Chemical Industry Cat# O19-12063
β-glycerophosphate Sigma Cat# 157241
PMA Sigma Cat# P8039-1MG
Ionomycin Sigma Cat# I0634-1MG
GolgiPlug™ BD Biosciences Cat# 555029
Carboxyfluorescein Diacetate Succinimidyl Ester (CFSE) Molecular Probes; Invitrogen Cat# C1157
BD Cytofix/Cytoperm Kit BD Biosciences Cat# 554714
Trizol Life Technologies Cat# 15596026
iScript cDNA Synthesis Kit BioRad Cat#1725035
TaqMan Gene Expression Assay NFATc1 Thermo Fisher Cat#4453320; Mm00479445_m1
TaqMan Gene Expression Assay CTSK Thermo Fisher Cat#4453320; Mm00484039_m1
TaqMan Gene Expression Assay TRAP Thermo Fisher Cat#4453320; Mm00475698_m1
TaqMan Gene Expression Assay Runx-2 Thermo Fisher Cat#4453320; Mm00501584_m1
TaqMan Gene Expression Assay ALP Thermo Fisher Cat#4453320; Mm00475834_m1
TaqMan Gene Expression Assay Osteocalcin Thermo Fisher Cat#4453320; Mm03413826_mH
TaqMan Gene Expression Assay TGF-β receptor I Thermo Fisher Cat#4453320; Mm00436964_m1
TaqMan Gene Expression Assay TGF-β receptor II Thermo Fisher Cat#4453320; Mm03024091_m1
TaqMan Gene Expression Assay β-Actin Thermo Fisher Cat#4453320; Mm02619580_g1
Neomycin Sigma Cat #N1876-100G
Cetylpyridinium chloride Sigma Cat# C0732-100G
Sodium phosphate Sigma Cat# 342483
Sodium hypochlorite Sigma Catalog # 7681-52-9

Critical commercial assays

Mouse IFN-γ ELISA kit Biolegend Cat#430801
Mouse TNF-α ELISA kit Biolegend Cat#430901
Alizarin Red Staining Kit EMD Millipore Corporation Cat#3070121
Leukocyte acid phosphatase kit Sigma Aldrich Catalog #387A-1KIT
Bone Resorption Kit CosmoBio Cat# CSR-BRA-48X2KIT

Experimental models: Organisms/strains

oim/oim (B6C3Fe-a/a-Col1a2oim/J) Jackson Laboratory Cat# 001815
FoxP3.GFP mice (C.Cg-Foxp3tm2Tch/J) Jackson Laboratory Cat#006769
C57Bl/6J mice Jackson Laboratory Cat#000664

Software and algorithms

FlowJo Software BD https://www.flowjo.com/solutions/flowjo/downloads/
CT Bone Visualization and Analysis Siemens Medical Solution Medical Solutions https://sharedimaging.com/
Analyze 12.0 software for Micro-CT AnalyzeDirect https://analyzedirect.com/
Electro force system EnduraTec ELF3200
Bioquant OSTEO II software platform Bioquant Image Analysis Corporation https://bioquant.com/
GraphPad Prism 6.0 software GraphPad software Inc. https://www.graphpad.com/scientific-software/prism/

Other

Irradiated mice diet Tekland Global Diets
Isofluorane Piramal Cat# NDC 66794-017-25