Fig. 2.

Prediction of ARGs using a pre-trained DeepARG-SS model. a Distribution of ARG read counts across antibiotic classes for the three flights (F1, F2, F3). b Correlation of read counts found by DeepARG-SS and those in Singh et al. [43]. Pearson's product-moment correlation r = 0.86, (p = 6.879e−07) for the three flights and their locations. c Read counts of ARG class across flights for each location for PMA-treated samples in Singh et al. [43, 44]. The antibiotic class (multi-drug) is not shown. Results are for ARGs with probability > 0.8