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. 2022 Jun 10;28(42):e202201115. doi: 10.1002/chem.202201115

Table 1.

Binding affinity values (K D app ) between PABP and modified poly(A) analogs

Entry

Abbreviation

Oligonucleotide

K D app [μM]

SD [μM]

1

A12

A12

0.73

0.13

2

Aps1

A9ApsA2 D1

1.59

0.18

3

Aps2

A9ApsA2 D2

0.52

0.10

4

Aps3

A10ApsA D1

1.28

0.16

5

Aps4

A10ApsA D2

0.66

0.12

6

Aps5

ApsA11 D1

0.58

0.70

7

Aps6

ApsA11D2

1.00

0.20

8

Aps7

A5ApsA6 D1

0.70

0.13

9

Aps8

A5ApsA6D2

0.80

0.30

10

Aps9

Aps11 A

1.50

0.20

11

Aps10

ApsA9ApsA

1.22

0.13

12

A11

A11

3.10

0.60

13

A13

A13

0.66

0.12

14

G1

A11G

2.70

0.60

15

G2

A5GA6

13.00

3.00

16

G3

GA11

0.90

0.20

17

Am1

A10AmA

1.00

0.20

18

Am2

A5AmA6

4.70

0.80

19

Am3

AmA11

1.10

0.30

20

Am4

Am11A

46.0

5.0

21

Am5

AmA11Am

0.83

0.18

22

Am6

AmpsAm9AmpsAm

31.0

3.0

23

Am7

A11Am

1.50

0.40

24

m6A1

A10m6A

0.41

0.09

25

m6A2

A5m6A6

9.2

1.3

26

m6A3

m6A‐A11

0.48

0.06

27

AF1

A10AFA

0.73

0.15

28

AF2

A5AFA6

2.90

0.40

29

AF3

AFA11

1.43

0.20

K D app – apparent dissociation constant value, determined via MST competition assay. SD – standard deviation of the KD, app values. Color‐coding: Aps – OAs with Aps modifications; A11 – OAs with G substitution and different chain lengths; Am – OAs with Am modifications; m6A – OAs with m6A modifications; AF – OAs with AF modifications