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. 2022 Aug 10;13:956224. doi: 10.3389/fimmu.2022.956224
ACC Adrenocortical carcinoma
ACTA2 Smooth muscle actin 2
AGR2 Anterior gradient protein 2
BLCA Bladder Urothelial Carcinoma
BRCA Breast invasive carcinoma
CAFs Cancer associated fibroblasts
CESC Cervical squamous cell carcinoma and endocervical adenocarcinoma
CHOL Cholangiocarcinoma
CI Confidence interval
CNV Copy number variation
COAD Colon adenocarcinoma
COL1A1 https://pubmed.ncbi.nlm.nih.gov/29906404/Collagen 1A1
CSF1R Colony-stimulating factor 1 receptor
DCs Dendritic cells
DEGs Differentially expressed genes
DLBC Lymphoid Neoplasm Diffuse Large B-cell Lymphoma
ECM Extracellular matrix
EOC Epithelial ovarian cancer
ESCA Esophageal carcinoma
FAP Fibroblast activation protein
FDR False Discovery Rate
FOXA2 Forkhead box A2
GBM Glioblastoma multiforme
GEO Gene Expression Omnibus data base
GO Gene ontolog
GSCA Gene Set Cancer Analysis
GSVA Gene set variation analysis
GTEx Genotype-Tissue Expression
HCC Hepatocellular carcinoma
HNSC Head and Neck squamous cell carcinoma
HR Hazards ratio
IL2-STAT Interleukin 2-Signal transducer and activator of transcription
IPS Immunophenoscores
iTreg induced Treg
KEGG Kyoto encyclopedia of genes agenomes
KICH Kidney Chromophobe
KIRC Kidney renal clear cell carcinoma
KIRP Kidney renal papillary cell carcinoma
LAML Acute Myeloid Leukemia
LGG Lower Grade Glioma
LIHC Liver hepatocellular carcinoma
LUAD Lung adenocarcinoma
LUSC Lung squamous cell carcinoma
MCs Mast cells
MDSCs Myeloid-derived suppressor cells
MESO Mesothelioma
NF-kB Nuclear factor-k-gene binding
NK Natural killer
nTreg natural Treg
OS Overall survival
OV Ovarian cancer
PAAD Pancreatic adenocarcinoma
PCA Principal component analysis
PCPG Pheochromocytoma and Paraganglioma
PDGFRA Platelet-derived growth factor receptor alpha
PDGFRB Platelet-derived growth factor receptor-beta
PDPN Podoplanin
PPI Protein-protein interaction
PRAD Prostate adenocarcinom
READ Rectum adenocarcinoma
SARC Sarcoma
SKCM Skin Cutaneous Melanoma
SNAI1 Snail
SNV Single nucleotide variation
SPDEF SAM pointed domain-containing ETS transcription factor
ssGSEA Single-sample gene set enrichment analysis
STAD Stomach adenocarcinoma
STRING Search tool for the retrieval of interacting genes/proteins
TCGA The Cancer Genome Atlas
TCIA The Cancer Immunome Atlas
TGCT Testicular Germ Cell tumours
TGF-β Transforming growth factor-β
THCA Thyroid carcinoma
THY1 https://pubmed.ncbi.nlm.nih.gov/20599951/Thy-1 cell surface antigen
THYM Thymoma
TIDE Tumor Immune Dysfunction and Exclusion
TISCH tumour Immune Single Cell Hub
TME tumour microenvironment
Tregs T regulatory cells
UCEC Uterine Corpus Endometrial Carcinoma
UCS Uterine Carcinosarcoma
UCSC University of California Santa Cruz
UNC5B Uncoordinated-5 homolog B
UVM Uveal Melanoma