Table 2.
Strain ID | Host | Source | Date of Isolation | Country | IC | STPa | STOx | cgMLST | VC a | Acquired OXA b | OXA-Flanking Pattern c | OXA-51 Type | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT | Cluster | ||||||||||||
IHIT28446 | Cat | Urine | 12/2014 | DE | 1 | 1 | 231 | 1808 | 1 | 1 | 58PL | B | 69 |
IHIT29418 | Dog | Wound | 06/2015 | DE | 1 | 1 | 231 | 1808 | 1 | 3 | 58PL | C | 69 |
IHIT29480 | Cat | CVC | 06/2015 | DE | 1 | 1 | 231 | 1808 | 1 | 4 | 58PL | C | 69 |
IHIT29548 | Env. | Air cond. | 06/2015 | DE | 1 | 1 | 231 | 1808 | 1 | 4 | 58PL | C | 69 |
IHIT29580 | Cat | Phlegmon | 06/2015 | DE | 1 | 1 | 231 | 1808 | 1 | 4 | 58PL | C | 69 |
IHIT29983 | Cat | Nose | 06/2015 | DE | 1 | 1 | 231 | 1808 | 1 | 6 | 58PL | D | 69 |
IHIT29985 | Dog | Abdomen | 03/2015 | DE | 1 | 1 | 231 | 1808 | 1 | 1 | 58PL | D | 69 |
IHIT30000 | Dog | Nose | 05/2015 | DE | 1 | 1 | 231 | 1808 | 1 | 1 | 58PL | B | 69 |
IHIT33215 | Dog | Urine | 11/2015 | DE | 1 | 1 | 231 | 1808 | 1 | 6 | 58PL | C | 69 |
IHIT32291 | Dog | Wound | 12/2015 | DE | 1 | 1 | 231 | 1808 | 1 | 1 | 58PL | B | 69 |
IHIT31605 | Dog | Wound | 05/2016 | DE | 1 | 1 | 231 | 1808 | 1 | 4 | 58PL | A | 69 |
IHIT31634 | Dog | CVC | 06/2016 | DE | 1 | 1 | 231 | 1808 | 1 | 4 | 58PL | A | 69 |
IHIT31820 | Dog | CVC | 06/2016 | DE | 1 | 1 | 231 | 1808 | 1 | 4 | 58PL | A | 69 |
IHIT32293 | Dog | Wound | 01/2016 | DE | 1 | 1 | 231 | 1808 | 1 | 13 | 58PL | A | 69 |
IHIT32295 | Dog | Urine | 03/2016 | DE | 1 | 1 | 231 | 1808 | 1 | 14 | 58PL | A | 69 |
IHIT32298 | Cat | Urine | 05/2016 | DE | 1 | 1 | 231 | 1808 | 1 | 1 | 58PL | A | 69 |
IHIT32299 | Cat | Wound | 06/2016 | DE | 1 | 1 | 231 | 1808 | 1 | 15 | 58PL | A | 69 |
IHIT33967 | Cat | CVC | 02/2017 | DE | 1 | 1 | 231 | 1808 | 1 | 4 | 58PL | A | 69 |
IHIT34210 | Dog | Throat | 04/2017 | DE | 1 | 1 | 231 | 1808 | 1 | 17 | 58PL | B | 69 |
IHIT34211 | Dog | Nose | 04/2017 | DE | 1 | 1 | 231 | 2175 | S | 17 | 58PL | B | 69 |
IHIT34212 | Dog | BAL | 04/2017 | DE | 1 | 1 | 231 | 1808 | 1 | 17 | 58PL | B | 69 |
IHIT34531 | Dog | Wound | 05/2017 | DE | 1 | 1 | 231 | 1808 | 1 | 1 | 58PL | A | 69 |
IHIT34607 | Dog | Abdomen | 05/2017 | DE | 1 | 1 | 231 | 1808 | 1 | 17 | 58PL | B | 69 |
IHIT35448 | Cat | Skin | 10/2017 | DE | 1 | 1 | 231 | 1808 | 1 | 20 | 58PL | B | 69 |
IHIT36934 | Dog | CVC | 04/2018 | DE | 1 | 1 | 231 | 1808 | 1 | 4 | 58PL | A | 69 |
IHIT36988 | Dog | Wound | 03/2018 | DE | 1 | 1 | 231 | 1808 | 1 | 21 | 58PL | B | 69 |
IHIT37071 | Dog | BAL | 05/2018 | DE | 1 | 1 | 231 | 1808 | 1 | 4 | 58PL | A | 69 |
IHIT38001 | Dog | Skin | 08/2018 | DE | 1 | 1 | 231 | 1808 | 1 | 22 | 58PL | B | 69 |
IHIT29027 | Dog | Urine | 07/2015 | IT | 8 | 10 | 447 | 2190 | S | 2 | 23PL | b | 68 |
IHIT29982 | Dog | Urine | 07/2015 | FR | 7 | 25 | 229 | 2184 | 3 | 5 | 23CH | a | 64 |
IHIT29995 | Dog | Ear | 07/2015 | FR | 7 | 25 | 229 | 2185 | S | 7 | 23CH | a | 64 |
IHIT30557 | Dog | Urine | 09/2015 | FR | 7 | 25 | 229 | 2184 | 3 | 5 | 23CH | a | 64 |
IHIT32250 | Cat | Urine | 08/2016 | FR | 7 | 25 | 229 | 2186 | 3 | 10 | 23CH | a | 64 |
IHIT32292 | Dog | Paw | 01/2016 | DE | 7 | 25 | 229 | 2177 | 4 | 12 | 23PL | b | 64 |
IHIT32297 | Dog | Trachea | 04/2016 | DE | 7 | 25 | 229 | 2177 | 4 | 12 | 23PL | b | 64 |
IHIT32362 | Dog | Urine | 10/2016 | DE | 7 | 25 | 229 | 2177 | 4 | 16 | 23PL | b | 64 |
IHIT34486 | Cat | Wound | 05/2017 | IT | 7 | 25 | 229 | 2182 | S | 18 | 23PL | c | 64 |
IHIT34502 | Cat | Urine | 05/2017 | FR | 7 | 25 | 229 | 2181 | S | 19 | 23PL | d | 64 |
IHIT29997 | Dog | BAL | 08/2015 | FR | n.t. | 578 | 799 | 2189 | S | 9 | 58PL | E | 65 |
IHIT29996 | Cat | Tissue | 06/2015 | FR | n.t. | 602 | 732 | 1368 | 2 | 8 | 23PL | e | 378 |
IHIT30558 | Cat | Urine | 09/2015 | FR | n.t. | 602 | 732 | 2191 | 2 | 8 | 23PL | e | 378 |
IHIT32289 | Cat | Urine | 01/2016 | FR | n.t. | 602 | 732 | 2191 | 2 | 11 | 23PL | e | 378 |
a VC = veterinary clinic; different veterinary clinics are indicated by numbers 1–22. b Location of gene on plasmid (PL) or chromosome (CH) is indicated. c: as illustrated in Figure 3 and Figure 4. Abbreviations: n.t., not typeable; Air cond., Air conditioner; BAL, bronchoalveolar lavage; CVC, central venous catheter; Env, environment; DE, Germany; IT, Italy; FR, France; IC, international clone; STPa, multilocus sequence type according to the Pasteur scheme; STOx, MLST type according to the Oxford scheme. CT, cluster type; S, singleton.