Table 1.
Physical parameters and the minimal inhibitory concentration (µg/mL) of designed peptides against E. faecium.
Peptide | Sequence a | NC b | Hph% c | Hy d | Hm e | rT f (min) | MIC (µg/mL) |
---|---|---|---|---|---|---|---|
EF C68 g | |||||||
1L | RRWQWRLLLL-NH2 | 3 | 60 | 0.805 | 0.168 | 18.083 | 16 |
2L | RRWLWRL-NH2 | 3 | 57 | NP | NP | 13.321 | >32 |
3L | LRWLWRRRWLWR-NH2 | 5 | 58 | 0.754 | 0.146 | 16.145 | 16 |
4L | RLWLWRRRWLWR-NH2 | 5 | 58 | 0.754 | 0.219 | 18.377 | 4 |
5L | RRWLWLRRWLWR-NH2 | 5 | 58 | 0.754 | 0.333 | 17.522 | 4 |
6L | RRWLWRLRWLWR-NH2 | 5 | 58 | 0.754 | 0.425 | 18.603 | 4 |
7L | RRWLWRRLWLWR-NH2 | 5 | 58 | 0.754 | 0.214 | 16.290 | 4 |
8L | RRWLWRRRWLWL-NH2 | 5 | 58 | 0.754 | 0.075 | 21.235 | 4 |
Amp | N.P. | N.P. | N.P. | N.P. | N.P. | N.P. | >32 |
Van | N.P. | N.P. | N.P. | N.P. | N.P. | N.P. | >32 |
a Peptide sequences have free N-terminus and amidated at C-terminus; b NC denotes net charge; c Hph% represents the hydrophobic amino acid compositions (total hydrophobic ratio) in the peptide; d Hy: Hydrophobicity and e Hm: hydrophobic moment of respective peptides calculated from HeliQuest analysis (https://heliquest.ipmc.cnrs.fr/, accessed on 20 June 2022); N.P. is Not predictable by the HeliQuest software; f HPLC retention time in mins on a C18 reverse-phase column; g E. faecium strain C68 is ampicillin (Amp) and vancomycin (Van) resistant [40].