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. 2022 Aug 18;12(8):1139. doi: 10.3390/biom12081139

Figure 1.

Figure 1

An illustrative example of sPS computation. An example of a signaling network GV,A with a set of update rules F. Let v1 a node subject to the knockout or the overexpression mutations. The mutations change F to F where the state value of v1 is frozen to 0 and 1, respectively, for tT. The sets of genes whose dynamics are influenced by the mutations are identified as Vk and Vo, respectively. Accordingly, sPS of v1 is computed as the ratio of the symmetric difference of Vk and Vo over the union of them.