Table 2.
Basic characteristics of the 5 differentially expressed circRNAs in GSE129409 which are involved in ceRNA network.
| CircRNA ID | logFC | Position | Genomic length | Strand | Best transcript | Gene symbol |
|---|---|---|---|---|---|---|
| hsa_circ_0056281 | 3.1 | chr2:120885263-120922486 | 37223 | + | NM_020909 | EPB41L5 |
| hsa_circ_0058794 | −3.2 | chr2:236626200-236659132 | 32932 | + | NM_001037131 | AGAP1 |
| hsa_circ_0006665 | 3.9 | chr10:15875628-15889942 | 14314 | − | NM_024948 | FAM188A |
| hsa_circ_0003638 | 3.1 | chr17:26490568-26499644 | 9076 | + | NM_016231 | NLK |
| hsa_circ_0004163 | −3.5 | chr18:662145-671451 | 9306 | + | NM_001071 | TYMS |
AGAP1 = ANK repeat and PH domain-containing protein 1, ceRNA = competing endogenous RNA, chr = chromosome, CicRNA = circular RNA, EPB41L5 = Band 4.1-like protein 5, FC = fold change, NLK = Nemo-like kinase, RNA = ribonucleic acid, TYMS = thymidylate synthase.