Table 1.
Virus detection in canine and feline patients.
| Animal, date of collection | Sample type | DPI owner | Diagnosis RT-qPCR copies/μl | Omicron RT-qPCR copies/μl | Sequence | Viral isolation |
|---|---|---|---|---|---|---|
| Cat_2, 20th December, 2021 | Rectal swab | 2 DPI | 9.34 x 102 | 1.76 x 102 | NA | Negative |
| Dog_8, 1st January, 2022 | Oropharyngeal swab | 3 DPI | 2.82 x 103 | 1.68 x 102 | B.1.1.529 | Negative |
| Cat_7, 16th January, 2022 | Oropharyngeal swab | 2 DPI | 2.06 x 102 | 83.4 | NA | Negative |
| Cat_19, 22th January, 2022 | Oropharyngeal swab | 3 DPI | 1.31 x 104 | 2.29 x 103 | B.1.1.529 | Negative |
| Cat_13, 27th January, 2022 | Oropharyngeal swab | 4 DPI | 3.63 x 102 | 1.05 x 102 | NA | Negative |
| Cat_26, 18th March, 2022 | Oropharyngeal swab | 2 DPI | 7.74 x 102 | 30.01 | NA | Negative |
| Cat_27, 18th March, 2022 | Oropharyngeal swab | 3 DPI | 3.86 x 102 | 43,82 | NA | Negative |
| Cat_28, 19th March, 2022 | Oropharyngeal swab | 4 DPI | 5.64 x 102 | 92,85 | NA | Negative |
Data related to patient species, date of sampling and relationship to timeframe of the owners' first positive test, and sample type, is shown for animals testing positive by two different RT-qPCR assays as described in methods.